RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ANKMY2Q8IV38 441 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 RAVER1Q8IY67 606 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 LRGUKQ96M69 825 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CCDC68Q9H2F9 335 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 COPEO14579 308 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 MED7O43513 233 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 TGFB3P10600 412 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 KLRC2P26717 231 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 PRDX6P30041 224 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 FOXD4Q12950 439 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 LRP8Q14114 963 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SPOCD1Q6ZMY3 1216 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 BPHLQ86WA6 291 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CHSY1Q86X52 802 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 ZC3H15Q8WU90 426 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 DDX1Q92499 740 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 HSPH1Q92598 858 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 MAELQ96JY0 434 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CTRCQ99895 268 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 ACSS3Q9H6R3 686 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 ANLNQ9NQW6 1124 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 C6orf203Q9P0P8 240 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 RABGEF1Q9UJ41 708 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 ZBTB42B2RXF5 422 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 PSMD12O00232 456 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SULT1C4O75897 302 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 HLA-DRAP01903 254 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SP4Q02446 784 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CREB5Q02930 508 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 KCNC4Q03721 635 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CUL2Q13617 745 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CRLF3Q8IUI8 442 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 THNSL1Q8IYQ7 743 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 PTCD2Q8WV60 388 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 CCDC138Q96M89 665 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 SACM1LQ9NTJ5 587 aa13.81□□□□□ -0.2
SYNGAP1-204ENST00000449372 MGAMO43451 1857 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 GJA5P36382 358 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 NAMPTP43490 491 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 GADL1Q6ZQY3 521 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TRPC4APQ8TEL6 797 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 HPS1Q92902 700 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 KRT75O95678 551 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 KITP10721 976 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 CCDC130P13994 396 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TFDP2Q14188 446 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TRIM16LQ309B1 348 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 BBS9Q3SYG4 887 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 HSF5Q4G112 596 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 MON1BQ7L1V2 547 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 POLNQ7Z5Q5 900 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 KBTBD6Q86V97 674 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 HPS6Q86YV9 775 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 PCYOX1LQ8NBM8 494 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TAMM41Q96BW9 452 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 C12orf43Q96C57 262 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 ZNF512Q96ME7 567 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 FAM213AQ9BRX8 229 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 UNKQ9C0B0 810 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 CLK4Q9HAZ1 481 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 KLHL3Q9UH77 587 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 GNPTGQ9UJJ9 305 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 ANK1P16157 1881 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 J3QRK9 145 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 FAM189A1O60320 539 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 PROCP04070 461 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 CDK18Q07002 472 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 C9orf131Q5VYM1 1079 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 EFCAB3Q8N7B9 438 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 ATP2A3Q93084 1043 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 TMEM143Q96AN5 459 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 FBXL8Q96CD0 374 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 ISOC1Q96CN7 298 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 FAM111AQ96PZ2 611 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 PAFAH2Q99487 392 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 PSMD13Q9UNM6 376 aa13.8□□□□□ -0.2
SYNGAP1-204ENST00000449372 KRBA1A5PL33 1030 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 PSMC3P17980 439 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 MAMLD1Q13495 774 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 LDLRAD1Q5T700 205 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 GPR180Q86V85 440 aa13.79□□□□□ -0.2
SYNGAP1-204ENST00000449372 CPNE9Q8IYJ1 553 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms