RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 BZW1Q7L1Q6 419 aaKnown RBP19.86■□□□□ 0.77
RPS28-202ENST00000449223 LZTR1Q8N653 840 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 RTL3Q8N8U3 475 aaKnown RBP19.86■□□□□ 0.77
RPS28-202ENST00000449223 SMRP1Q8NCR6 262 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 SH3RF2Q8TEC5 729 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 ING5Q8WYH8 240 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 P3H4Q92791 437 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 OLFM3Q96PB7 478 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 ZYG11BQ9C0D3 744 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 TRPV4Q9HBA0 871 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 TMEM248Q9NWD8 314 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CFAP97Q9P2B7 532 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 ZNF212Q9UDV6 495 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CCL26Q9Y258 94 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 KIF26AQ9ULI4 1882 aaPredicted RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 PRAMEF12O95522 483 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 IGFBP4P22692 258 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 SERPINB6P35237 376 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 OASLQ15646 514 aaKnown RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 GLE1Q53GS7 698 aaKnown RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 TTC39BQ5VTQ0 682 aaPredicted RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 ARID3BQ8IVW6 561 aaPredicted RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 ZSCAN18Q8TBC5 510 aaPredicted RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 C1orf54Q8WWF1 131 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 FGF13Q92913 245 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 IGSF8Q969P0 613 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 MAGOHBQ96A72 148 aaKnown RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 RIPOR3Q96MK2 946 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 KLC2Q9H0B6 622 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 DDX47Q9H0S4 455 aaKnown RBP19.85■□□□□ 0.77
RPS28-202ENST00000449223 DTLQ9NZJ0 730 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 SH3BP1Q9Y3L3 701 aa19.85■□□□□ 0.77
RPS28-202ENST00000449223 GOLGA6L7A0A1B0GV03 622 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 COILP38432 576 aaPredicted RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 MTHFRP42898 656 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 VCPP55072 806 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 XRCC4Q13426 336 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 BYSLQ13895 437 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 DHX34Q14147 1143 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 CBX2Q14781 532 aaPredicted RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 RABGAP1LQ5R372 815 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 RWDD4Q6NW29 188 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 TTC27Q6P3X3 843 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 CCDC137Q6PK04 289 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 CELF5Q8N6W0 485 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 MYRIPQ8NFW9 859 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 RIN3Q8TB24 985 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 ATG4AQ8WYN0 398 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 PRICKLE1Q96MT3 831 aaPredicted RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 ASB16Q96NS5 453 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 SMG9Q9H0W8 520 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 OBP2AQ9NY56 170 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 SAE1Q9UBE0 346 aaPredicted RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 FEZ2Q9UHY8 353 aaPredicted RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 DNPEPQ9ULA0 475 aa19.84■□□□□ 0.77
RPS28-202ENST00000449223 DRG1Q9Y295 367 aaKnown RBP19.84■□□□□ 0.77
RPS28-202ENST00000449223 NCAM2O15394 837 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 MFSD11O43934 449 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 ITGAVP06756 1048 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 CHKAP35790 457 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 GBE1Q04446 702 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 SLC10A2Q12908 348 aaPredicted RBP19.83■□□□□ 0.77
RPS28-202ENST00000449223 AFMIDQ63HM1 303 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 RNF43Q68DV7 783 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 NPNTQ6UXI9 565 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 CHST9Q7L1S5 443 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 UMODL1-AS1Q8N2C9 162 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 NPWQ8N729 165 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 SMARCD2Q92925 531 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 OTUB2Q96DC9 234 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 RPRD1AQ96P16 312 aaPredicted RBP19.83■□□□□ 0.77
RPS28-202ENST00000449223 KRT12Q99456 494 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 APOL5Q9BWW9 433 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 CDH22Q9UJ99 828 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 CDH7Q9ULB5 785 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 MFHAS1Q9Y4C4 1052 aa19.83■□□□□ 0.77
RPS28-202ENST00000449223 XIRP2A4UGR9 3374 aa19.83■□□□□ 0.76
RPS28-202ENST00000449223 MCF2LO15068 1137 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 CTIFO43310 598 aaKnown RBP19.82■□□□□ 0.76
RPS28-202ENST00000449223 MAPKAPK2P49137 400 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 MPP7Q5T2T1 576 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 MAATS1Q7Z4T9 603 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 BBS7Q8IWZ6 715 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 LGI2Q8N0V4 545 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 ATL2Q8NHH9 583 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 SUSD6Q92537 303 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 HAUS1Q96CS2 278 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 MYEOVQ96EZ4 313 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 NECTIN4Q96NY8 510 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 MPP6Q9NZW5 540 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 HEY1Q9Y5J3 304 aa19.82■□□□□ 0.76
RPS28-202ENST00000449223 ZFP37Q9Y6Q3 630 aaPredicted RBP19.82■□□□□ 0.76
RPS28-202ENST00000449223 HACD1B0YJ81 288 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 ZNF189O75820 626 aaPredicted RBP19.81■□□□□ 0.76
RPS28-202ENST00000449223 IRAK1P51617 712 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 CDH4P55283 916 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 LMNB2Q03252 620 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 ZNF33AQ06730 810 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 GALNT2Q10471 571 aa19.81■□□□□ 0.76
RPS28-202ENST00000449223 ALFQ53S48 1182 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms