RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ANKS1BQ7Z6G8 1248 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 PHLDB2Q86SQ0 1253 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 TXNDC5Q8NBS9 432 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 HJURPQ8NCD3 748 aaPredicted RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 TSTD1Q8NFU3 115 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 TMA16Q96EY4 203 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 P2RY11Q96G91 374 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 BTN2A3PQ96KV6 586 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 PRICKLE1Q96MT3 831 aaPredicted RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 NUCKS1Q9H1E3 243 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP39-206ENST00000448971 RRN3Q9NYV6 651 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 ADAM22Q9P0K1 906 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 XPO7Q9UIA9 1087 aaKnown RBP15.09■□□□□ 0.01
USP39-206ENST00000448971 MMP17Q9ULZ9 603 aa15.09■□□□□ 0.01
USP39-206ENST00000448971 PATE3B3GLJ2 98 aa15.08■□□□□ 0
USP39-206ENST00000448971 F5H5T6 163 aa15.08■□□□□ 0
USP39-206ENST00000448971 KHNYNO15037 678 aaKnown RBP15.08■□□□□ 0
USP39-206ENST00000448971 CBFA2T2O43439 604 aa15.08■□□□□ 0
USP39-206ENST00000448971 TBL1XO60907 577 aa15.08■□□□□ 0
USP39-206ENST00000448971 TOP3BO95985 862 aaKnown RBP15.08■□□□□ 0
USP39-206ENST00000448971 CALB1P05937 261 aa15.08■□□□□ 0
USP39-206ENST00000448971 CEACAM1P13688 526 aa15.08■□□□□ 0
USP39-206ENST00000448971 HNRNPLP14866 589 aaKnown RBP eCLIP15.08■□□□□ 0
USP39-206ENST00000448971 CSRP1P21291 193 aaKnown RBP15.08■□□□□ 0
USP39-206ENST00000448971 TNFAIP3P21580 790 aa15.08■□□□□ 0
USP39-206ENST00000448971 BCKDHBP21953 392 aa15.08■□□□□ 0
USP39-206ENST00000448971 FLT3P36888 993 aa15.08■□□□□ 0
USP39-206ENST00000448971 KIR2DL1P43626 348 aaPredicted RBP15.08■□□□□ 0
USP39-206ENST00000448971 IRX4P78413 519 aa15.08■□□□□ 0
USP39-206ENST00000448971 DEUP1Q05D60 604 aa15.08■□□□□ 0
USP39-206ENST00000448971 KLHL30Q0D2K2 578 aa15.08■□□□□ 0
USP39-206ENST00000448971 HSF5Q4G112 596 aaPredicted RBP15.08■□□□□ 0
USP39-206ENST00000448971 EOGTQ5NDL2 527 aa15.08■□□□□ 0
USP39-206ENST00000448971 EMC10Q5UCC4 262 aa15.08■□□□□ 0
USP39-206ENST00000448971 PIK3R6Q5UE93 754 aa15.08■□□□□ 0
USP39-206ENST00000448971 C11orf74Q86VG3 221 aa15.08■□□□□ 0
USP39-206ENST00000448971 MFN1Q8IWA4 741 aa15.08■□□□□ 0
USP39-206ENST00000448971 CCDC117Q8IWD4 279 aaPredicted RBP15.08■□□□□ 0
USP39-206ENST00000448971 IL17RCQ8NAC3 791 aa15.08■□□□□ 0
USP39-206ENST00000448971 OLIG1Q8TAK6 271 aa15.08■□□□□ 0
USP39-206ENST00000448971 AZIN2Q96A70 460 aa15.08■□□□□ 0
USP39-206ENST00000448971 IQCDQ96DY2 449 aa15.08■□□□□ 0
USP39-206ENST00000448971 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
USP39-206ENST00000448971 TPSD1Q9BZJ3 242 aa15.08■□□□□ 0
USP39-206ENST00000448971 EDEM3Q9BZQ6 932 aa15.08■□□□□ 0
USP39-206ENST00000448971 XPO4Q9C0E2 1151 aaKnown RBP15.08■□□□□ 0
USP39-206ENST00000448971 HAUS4Q9H6D7 363 aa15.08■□□□□ 0
USP39-206ENST00000448971 STIM2Q9P246 746 aa15.08■□□□□ 0
USP39-206ENST00000448971 ZMIZ1Q9ULJ6 1067 aa15.08■□□□□ 0
USP39-206ENST00000448971 PRRT4C9JH25 899 aa15.07■□□□□ 0
USP39-206ENST00000448971 SPINK2P20155 84 aa15.07■□□□□ 0
USP39-206ENST00000448971 TACR2P21452 398 aa15.07■□□□□ 0
USP39-206ENST00000448971 PBX1P40424 430 aa15.07■□□□□ 0
USP39-206ENST00000448971 ZNF252P-AS1Q0IIN9 211 aa15.07■□□□□ 0
USP39-206ENST00000448971 CDH18Q13634 790 aa15.07■□□□□ 0
USP39-206ENST00000448971 CRY1Q16526 586 aa15.07■□□□□ 0
USP39-206ENST00000448971 GEN1Q17RS7 908 aa15.07■□□□□ 0
USP39-206ENST00000448971 MS4A13Q5J8X5 152 aa15.07■□□□□ 0
USP39-206ENST00000448971 OTUD1Q5VV17 481 aaPredicted RBP15.07■□□□□ 0
USP39-206ENST00000448971 EGFLAMQ63HQ2 1017 aa15.07■□□□□ 0
USP39-206ENST00000448971 E4F1Q66K89 784 aaPredicted RBP15.07■□□□□ 0
USP39-206ENST00000448971 TMEM92Q6UXU6 159 aa15.07■□□□□ 0
USP39-206ENST00000448971 IRF2BP2Q7Z5L9 587 aa15.07■□□□□ 0
USP39-206ENST00000448971 PHF13Q86YI8 300 aaPredicted RBP15.07■□□□□ 0
USP39-206ENST00000448971 CHPFQ8IZ52 775 aa15.07■□□□□ 0
USP39-206ENST00000448971 LGI2Q8N0V4 545 aa15.07■□□□□ 0
USP39-206ENST00000448971 EMC1Q8N766 993 aa15.07■□□□□ 0
USP39-206ENST00000448971 ZNF557Q8N988 423 aaPredicted RBP15.07■□□□□ 0
USP39-206ENST00000448971 MDGA1Q8NFP4 955 aa15.07■□□□□ 0
USP39-206ENST00000448971 UCMAQ8WVF2 138 aa15.07■□□□□ 0
USP39-206ENST00000448971 CPLX3Q8WVH0 158 aa15.07■□□□□ 0
USP39-206ENST00000448971 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
USP39-206ENST00000448971 TBCBQ99426 244 aa15.07■□□□□ 0
USP39-206ENST00000448971 NPY6RQ99463 290 aa15.07■□□□□ 0
USP39-206ENST00000448971 SLC2A11Q9BYW1 496 aa15.07■□□□□ 0
USP39-206ENST00000448971 IRX2Q9BZI1 471 aaPredicted RBP15.07■□□□□ 0
USP39-206ENST00000448971 CIPCQ9C0C6 399 aa15.07■□□□□ 0
USP39-206ENST00000448971 TMEM9BQ9NQ34 198 aa15.07■□□□□ 0
USP39-206ENST00000448971 PIGVQ9NUD9 493 aa15.07■□□□□ 0
USP39-206ENST00000448971 CLEC4EQ9ULY5 219 aa15.07■□□□□ 0
USP39-206ENST00000448971 SLC27A6Q9Y2P4 619 aa15.07■□□□□ 0
USP39-206ENST00000448971 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
USP39-206ENST00000448971 A0A0A0MRY4 1105 aa15.06■□□□□ 0
USP39-206ENST00000448971 A0A1W2PQJ5 194 aa15.06■□□□□ 0
USP39-206ENST00000448971 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
USP39-206ENST00000448971 KCNU1A8MYU2 1149 aa15.06■□□□□ 0
USP39-206ENST00000448971 SGK1O00141 431 aa15.06■□□□□ 0
USP39-206ENST00000448971 GFRA2O00451 464 aa15.06■□□□□ 0
USP39-206ENST00000448971 CISD3P0C7P0 127 aa15.06■□□□□ 0
USP39-206ENST00000448971 HOXB2P14652 356 aa15.06■□□□□ 0
USP39-206ENST00000448971 TFE3P19532 575 aaPredicted RBP15.06■□□□□ 0
USP39-206ENST00000448971 SDC4P31431 198 aa15.06■□□□□ 0
USP39-206ENST00000448971 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
USP39-206ENST00000448971 GGCXP38435 758 aa15.06■□□□□ 0
USP39-206ENST00000448971 WASP42768 502 aa15.06■□□□□ 0
USP39-206ENST00000448971 RPS24P62847 133 aaKnown RBP15.06■□□□□ 0
USP39-206ENST00000448971 FOXC1Q12948 553 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms