RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RIN3Q8TB24 985 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 HAUS1Q96CS2 278 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 RPGRIP1Q96KN7 1286 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 UBE2ZQ9H832 354 aaPredicted RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 ETNK2Q9NVF9 386 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 MPP6Q9NZW5 540 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 C5orf42Q9H799 3197 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 DRGXA6NNA5 263 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 CCDC188H7C350 402 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 APOC4-APOC2K7ER74 178 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 TRDMT1O14717 391 aaKnown RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 DCLK1O15075 740 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 APOC2P02655 101 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 RHOQP17081 205 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 VIPR2P41587 438 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 SIX1Q15475 284 aaPredicted RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 ARTNQ5T4W7 220 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 NCBP2-AS2Q69YL0 99 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 C1orf228Q6PIY5 440 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 FAM217AQ8IXS0 508 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 P3H4Q92791 437 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 MYADMQ96S97 322 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 RBM12Q9NTZ6 932 aaKnown RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 SAE1Q9UBE0 346 aaPredicted RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 R3HDM2Q9Y2K5 976 aaKnown RBP20.12■□□□□ 0.81
SGCE-207ENST00000447873 HEY1Q9Y5J3 304 aa20.12■□□□□ 0.81
SGCE-207ENST00000447873 TSPAN3O60637 253 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 C5orf22Q49AR2 442 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 ALFQ53S48 1182 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 CFAP52Q8N1V2 620 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 CPXM2Q8N436 756 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 PRELID2Q8N945 189 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 ACTL9Q8TC94 416 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 C1orf54Q8WWF1 131 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 SUSD6Q92537 303 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 MYEOVQ96EZ4 313 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 TRPV4Q9HBA0 871 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 HOMER3Q9NSC5 361 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 DONSONQ9NYP3 566 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 TBC1D14Q9P2M4 693 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 MFHAS1Q9Y4C4 1052 aa20.11■□□□□ 0.81
SGCE-207ENST00000447873 ZFP37Q9Y6Q3 630 aaPredicted RBP20.11■□□□□ 0.81
SGCE-207ENST00000447873 TYW5A2RUC4 315 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 RIOK3O14730 519 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 CNTN5O94779 1100 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 SLU7O95391 586 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 LAMP2P13473 410 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 SERPINB6P35237 376 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 NR2C2P49116 596 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 IRAK1P51617 712 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 VCPP55072 806 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 OTUD4Q01804 1114 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 C2orf54Q08AI8 447 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 PAFAH1B3Q15102 231 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 TTC39BQ5VTQ0 682 aaPredicted RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 NPNTQ6UXI9 565 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 RTL3Q8N8U3 475 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 TMA16Q96EY4 203 aaKnown RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 PRICKLE1Q96MT3 831 aaPredicted RBP20.1■□□□□ 0.81
SGCE-207ENST00000447873 FAM118BQ9BPY3 351 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 ZFP14Q9HCL3 533 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 XIRP2A4UGR9 3374 aa20.1■□□□□ 0.81
SGCE-207ENST00000447873 SLC9A3R1O14745 358 aaPredicted RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 PECAM1P16284 738 aaPredicted RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 RPS24P62847 133 aaKnown RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 GBE1Q04446 702 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 CCNG2Q16589 344 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 TFAP2DQ7Z6R9 452 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 NLRP14Q86W24 1093 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 CIR1Q86X95 450 aaPredicted RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 KIAA1958Q8N8K9 716 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 TDRD5Q8NAT2 981 aaKnown RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 HJURPQ8NCD3 748 aaPredicted RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 BPIFB1Q8TDL5 484 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 ATG4AQ8WYN0 398 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 HLA-CQ95604 372 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 MAGOHBQ96A72 148 aaKnown RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 RSPRY1Q96DX4 576 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 LRRC3BQ96PB8 259 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 FRMD8P1Q9BZ68 369 aaPredicted RBP20.09■□□□□ 0.81
SGCE-207ENST00000447873 TMEM248Q9NWD8 314 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 OBP2AQ9NY56 170 aa20.09■□□□□ 0.81
SGCE-207ENST00000447873 HEPACAM2A8MVW5 462 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 WASH4PA8MWX3 477 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 MFSD11O43934 449 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 PHF2O75151 1096 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 SGSHP51688 502 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 SMAD4Q13485 552 aaKnown RBP20.08■□□□□ 0.81
SGCE-207ENST00000447873 CYP1B1Q16678 543 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 BZW1Q7L1Q6 419 aaKnown RBP20.08■□□□□ 0.81
SGCE-207ENST00000447873 OTOP3Q7RTS5 596 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 KLHL7Q8IXQ5 586 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 LZTR1Q8N653 840 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 C12orf50Q8NA57 414 aaPredicted RBP20.08■□□□□ 0.81
SGCE-207ENST00000447873 DDI1Q8WTU0 396 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 E2F7Q96AV8 911 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 OTUB2Q96DC9 234 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 DDX47Q9H0S4 455 aaKnown RBP20.08■□□□□ 0.81
SGCE-207ENST00000447873 RETREG1Q9H6L5 497 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms