RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 AP4E1Q9UPM8 1137 aa11.97□□□□□ -0.49
LINC00408-201ENST00000447784 HS3ST4Q9Y661 456 aa11.97□□□□□ -0.49
LINC00408-201ENST00000447784 ZDBF2Q9HCK1 2354 aa11.97□□□□□ -0.49
LINC00408-201ENST00000447784 A0A0U1RQJ8 604 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 NEDD8-MDP1E9PL57 170 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 TRDMT1O14717 391 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 CREB3O43889 395 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 KIF5CO60282 957 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 RARAP10276 462 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 CHRNB1P11230 501 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 ADH5P11766 374 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 L1CAMP32004 1257 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 ZNF135P52742 658 aaPredicted RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 PPP6R3Q5H9R7 873 aaPredicted RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 KCNT1Q5JUK3 1230 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 LRRC38Q5VT99 294 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 TTC39BQ5VTQ0 682 aaPredicted RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 DAB2IPQ5VWQ8 1189 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 RFWD3Q6PCD5 774 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 RHBDF2Q6PJF5 856 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 TMEM25Q86YD3 366 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 FAM217AQ8IXS0 508 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 ZNF557Q8N988 423 aaPredicted RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 TEKT4Q8WW24 435 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 BHMTQ93088 406 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 XPO6Q96QU8 1125 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 SNRNP25Q9BV90 132 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 CHRDQ9H2X0 955 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 HPS4Q9NQG7 708 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 TMPRSS4Q9NRS4 437 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 GPATCH2LQ9NWQ4 482 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 DDX56Q9NY93 547 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 FBXO4Q9UKT5 387 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 AMFRQ9UKV5 643 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 NDRG2Q9UN36 371 aaKnown RBP11.96□□□□□ -0.49
LINC00408-201ENST00000447784 HYOU1Q9Y4L1 999 aa11.96□□□□□ -0.49
LINC00408-201ENST00000447784 WDFY4Q6ZS81 3184 aa11.96□□□□□ -0.5
LINC00408-201ENST00000447784 GRID2IPA4D2P6 1211 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 E9PAM4 449 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 H3BRJ5 948 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 LAMTOR5O43504 91 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 TBL1XO60907 577 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 CYP17A1P05093 508 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SLC6A4P31645 630 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 GGCXP38435 758 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 ARL4AP40617 200 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SOX9P48436 509 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 TAS2R40P59535 323 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SLC25A11Q02978 314 aaKnown RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 LRRC32Q14392 662 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 PDK2Q15119 407 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SMTNL2Q2TAL5 461 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF528Q3MIS6 628 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 FBXL22Q6P050 247 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 TXNDC11Q6PKC3 985 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 MAML2Q8IZL2 1156 aaPredicted RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 CCAR2Q8N163 923 aaKnown RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 TRIM58Q8NG06 486 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 TBC1D31Q96DN5 1066 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 ZYG11BQ9C0D3 744 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 GOLPH3Q9H4A6 298 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 LMAN1LQ9HAT1 526 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 ANLNQ9NQW6 1124 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 FAM86C1Q9NVL1 165 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SPATA6Q9NWH7 488 aaPredicted RBP11.95□□□□□ -0.5
LINC00408-201ENST00000447784 DONSONQ9NYP3 566 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 MARK1Q9P0L2 795 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 SNX10Q9Y5X0 201 aa11.95□□□□□ -0.5
LINC00408-201ENST00000447784 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CCDC66A2RUB6 948 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 LRRD1A4D1F6 860 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 MIF4GDA9UHW6 222 aaKnown RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 H0Y626 953 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 EEF2KO00418 725 aaKnown RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 HOXC11O43248 304 aaPredicted RBP11.94□□□□□ -0.5
LINC00408-201ENST00000447784 PSTPIP1O43586 416 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 KRT1P04264 644 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 SP9P0CG40 484 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 TYRP14679 529 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 TCF4P15884 667 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 IL1R2P27930 398 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 EPHB2P29323 1055 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 HTR7P34969 479 aa11.94□□□□□ -0.5
LINC00408-201ENST00000447784 CETN2P41208 172 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms