RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CST6Q15828 149 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ZNF699Q32M78 642 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ZNF667Q5HYK9 610 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 KIAA1614Q5VZ46 1190 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 CLEC20AQ6ZU45 233 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 CHST9Q7L1S5 443 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SCD5Q86SK9 330 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 UNC93AQ86WB7 457 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SPATS2Q86XZ4 545 aaKnown RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 C12orf29Q8N999 325 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 EXD3Q8N9H8 876 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 RDH13Q8NBN7 331 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 CCDC127Q96BQ5 260 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 EPSTI1Q96J88 318 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SLC46A1Q96NT5 459 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 OMDQ99983 421 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 FGFBP2Q9BYJ0 223 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 NEUROG2Q9H2A3 272 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ABCB8Q9NUT2 735 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 PANK4Q9NVE7 773 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ANKMY1Q9P2S6 941 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 TJP2Q9UDY2 1190 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SERGEFQ9UGK8 458 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 GGA2Q9UJY4 613 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 FBXO2Q9UK22 296 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SRPRBQ9Y5M8 271 aaKnown RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 USP3Q9Y6I4 520 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 DOPEY2Q9Y3R5 2298 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ARID1BQ8NFD5 2236 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 TMEM131Q92545 1883 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 A0A1W2PP55 124 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 MID1O15344 667 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 STX6O43752 255 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 PHACTR2O75167 634 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 CSO75390 466 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 RNASEH2AO75792 299 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 HMBSP08397 361 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SFTPCP11686 197 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 PABPC1P11940 636 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 CD46P15529 392 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 POLR2EP19388 210 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 RBMS1P29558 406 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 NUDT1P36639 197 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 HARS2P49590 506 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 NDST1P52848 882 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 AP3M2P53677 418 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SNRPFP62306 86 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SERINC3Q13530 473 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 NCOA4Q13772 614 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 UBAP2LQ14157 1087 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SLC39A14Q15043 492 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 HNRNPA1L2Q32P51 320 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 C6orf132Q5T0Z8 1188 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 MPP7Q5T2T1 576 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 RRAGBQ5VZM2 374 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 MBLAC2Q68D91 279 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 NAPEPLDQ6IQ20 393 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 CCDC65Q8IXS2 484 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 ARHGAP18Q8N392 663 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SLC25A45Q8N413 288 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 ZNF557Q8N988 423 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 KDM1BQ8NB78 822 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 XXYLT1Q8NBI6 393 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 OR4C6Q8NH72 309 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 PLD4Q96BZ4 506 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 TMA16Q96EY4 203 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 CLIC6Q96NY7 704 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 USP28Q96RU2 1077 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SEMA3CQ99985 751 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 ABCG4Q9H172 646 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SDCBP2Q9H190 292 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 USP29Q9HBJ7 922 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 AGPAT3Q9NRZ7 376 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 SEPT3Q9UH03 358 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 RASAL2Q9UJF2 1139 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 STOML2Q9UJZ1 356 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 PCDHGA8Q9Y5G5 932 aa7.38□□□□□ -1.23
LRRC28-203ENST00000447360 MORC2Q9Y6X9 1032 aaPredicted RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
LRRC28-203ENST00000447360 A0A1B0GVM2 712 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SLC12A8A0AV02 714 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 TARSL2A2RTX5 802 aaKnown RBP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 CDRT15L2A8MXV6 281 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 EIF3DO15371 548 aaKnown RBP eCLIP7.37□□□□□ -1.23
LRRC28-203ENST00000447360 TGFB1I1O43294 461 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SIN3BO75182 1162 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 LATS1O95835 1130 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ITGB2P05107 769 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SLFN14P0C7P3 912 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 GOT1P17174 413 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 DGKAP23743 735 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 ADORA2BP29275 332 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 SLC8A1P32418 973 aa7.37□□□□□ -1.23
LRRC28-203ENST00000447360 HOXD13P35453 343 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms