RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
PMS1-215ENST00000447232 SHANK1Q9Y566 2161 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 WASH3PC4AMC7 463 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PRRT4C9JH25 899 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 TRIM38O00635 465 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 HNRNPRO43390 633 aaKnown RBP3.49□□□□□ -1.85
PMS1-215ENST00000447232 SIGLEC6O43699 453 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 RTN2O75298 545 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 OLFM2O95897 454 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 LDLRP01130 860 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 GP1BAP07359 652 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ITGA2BP08514 1039 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 CYP21A2P08686 494 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PFKLP17858 780 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 HDCP19113 662 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 LRPAP1P30533 357 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ACSL1P33121 698 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 HSPA4P34932 840 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 CD96P40200 585 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ARRB1P49407 418 aaPredicted RBP3.49□□□□□ -1.85
PMS1-215ENST00000447232 ZNF132P52740 706 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 COPAP53621 1224 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 C21orf59P57076 290 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 SLC7A9P82251 487 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 GAD2Q05329 585 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 SMARCB1Q12824 385 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PPP2R5CQ13362 524 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 KCNB1Q14721 858 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 DCAF6Q58WW2 860 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ARMCX5Q6P1M9 558 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 BORAQ6PGQ7 559 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 OTUD6AQ7L8S5 288 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ADAT2Q7Z6V5 191 aaKnown RBP3.49□□□□□ -1.85
PMS1-215ENST00000447232 LRRTM3Q86VH5 581 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 TMPRSS6Q8IU80 811 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 REXO1Q8N1G1 1221 aaKnown RBP3.49□□□□□ -1.85
PMS1-215ENST00000447232 FANCBQ8NB91 859 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 RNF214Q8ND24 703 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 SIPA1Q96FS4 1042 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 ATXN7L3BQ96GX2 97 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 LXNQ9BS40 222 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PTPRHQ9HD43 1115 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 DCTN4Q9UJW0 460 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PCDHB6Q9Y5E3 794 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 PCDHGA7Q9Y5G6 932 aa3.49□□□□□ -1.85
PMS1-215ENST00000447232 TACC2O95359 2948 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CYP3A7-CYP3A51PA0A087WV96 503 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 A0A1B0GVM2 712 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 A0A1W2PR77 199 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 LRRIQ4A6NIV6 560 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 C10orf142B7Z368 130 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 VPS4BO75351 444 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 FAM155BO75949 473 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 TNFSF15O95150 251 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 IGHV4-34P06331 123 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 C8BP07358 591 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 THEGLP0DJG4 465 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CKMT1AP12532 417 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 FUT4P22083 530 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 NME2P22392 152 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CYP3A7P24462 503 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 GPR15P49685 360 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 YARSP54577 528 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 MLLT10P55197 1068 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 NOLC1Q14978 699 aaKnown RBP eCLIP3.48□□□□□ -1.85
PMS1-215ENST00000447232 ENOX2Q16206 610 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 NT5DC1Q5TFE4 455 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 NAT16Q8N8M0 369 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 NCOA7Q8NI08 942 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 GPBAR1Q8TDU6 330 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 DUSP9Q99956 384 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 UNKQ9C0B0 810 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 POLR3FQ9H1D9 316 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 ERVMER34-1Q9H9K5 563 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 TUBGCP4Q9UGJ1 667 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 ADAMTS6Q9UKP5 1117 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 VPS4AQ9UN37 437 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 MAGED2Q9UNF1 606 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 MYH10P35580 1976 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 LY6G6EA0A0G2JKS1 128 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 E7EWF7 191 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 SH2B2O14492 632 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 SCAMP3O14828 347 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 LIPCP11150 499 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 BMP6P22004 513 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 NTF4P34130 210 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 PDE6CP51160 858 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 PDE1AP54750 535 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 HNRNPUQ00839 825 aaKnown RBP eCLIP3.48□□□□□ -1.85
PMS1-215ENST00000447232 SAFBQ15424 915 aaKnown RBP eCLIP3.48□□□□□ -1.85
PMS1-215ENST00000447232 IFI16Q16666 785 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 ZXDCQ2QGD7 858 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 ATF7IP2Q5U623 682 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CWC27Q6UX04 472 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 FAM214BQ7L5A3 538 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 RALYLQ86SE5 291 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 C14orf80Q86SX3 495 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 FAM114A1Q8IWE2 563 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 ZBTB8OSQ8IWT0 167 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms