RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PIP4K2CQ8TBX8 421 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 CLEC4CQ8WTT0 213 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 COPS5Q92905 334 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 BTBD9Q96Q07 612 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 RTKNQ9BST9 563 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SYBUQ9NX95 663 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 ETAA1Q9NY74 926 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 TXNDC16Q9P2K2 825 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SNX9Q9Y5X1 595 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 RNF103O00237 685 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SORBS2O94875 1100 aaKnown RBP19.57■□□□□ 0.72
SDCBP-204ENST00000447182 PABPC4LP0CB38 370 aaKnown RBP19.57■□□□□ 0.72
SDCBP-204ENST00000447182 COX4I1P13073 169 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 INSRRP14616 1297 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 VCLP18206 1134 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 NCF2P19878 526 aaPredicted RBP19.57■□□□□ 0.72
SDCBP-204ENST00000447182 PEX2P28328 305 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 NUMBP49757 651 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 AQP4P55087 323 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 TBL3Q12788 808 aaKnown RBP19.57■□□□□ 0.72
SDCBP-204ENST00000447182 CFAP157Q5JU67 520 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 PSTKQ8IV42 348 aaKnown RBP19.57■□□□□ 0.72
SDCBP-204ENST00000447182 PHTF2Q8N3S3 785 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 CERS2Q96G23 380 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 P2RY11Q96G91 374 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 KCNK16Q96T55 309 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 FERMT1Q9BQL6 677 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 CDH19Q9H159 772 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 CYP4F11Q9HBI6 524 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 SNX15Q9NRS6 342 aa19.57■□□□□ 0.72
SDCBP-204ENST00000447182 KLHL33A6NCF5 533 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 H3BNX3 289 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 FZD9O00144 591 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 ADCY6O43306 1168 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 MFSD11O43934 449 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 AP1G2O75843 785 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 PGK2P07205 417 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 IGBP1P78318 339 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 EN1Q05925 392 aaPredicted RBP19.56■□□□□ 0.72
SDCBP-204ENST00000447182 BST2Q10589 180 aaKnown RBP19.56■□□□□ 0.72
SDCBP-204ENST00000447182 LRRC36Q1X8D7 754 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 POTEAQ6S8J7 498 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 HPS6Q86YV9 775 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 FBXO16Q8IX29 292 aaPredicted RBP19.56■□□□□ 0.72
SDCBP-204ENST00000447182 CCDC124Q96CT7 223 aaKnown RBP19.56■□□□□ 0.72
SDCBP-204ENST00000447182 R3HDMLQ9H3Y0 253 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 COG4Q9H9E3 785 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 FZD10Q9ULW2 581 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 DERAQ9Y315 318 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 SCN4AP35499 1836 aa19.56■□□□□ 0.72
SDCBP-204ENST00000447182 TMEM114B3SHH9 223 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 DCXO43602 365 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 AP1G1O43747 822 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 TSPAN1O60635 241 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 SLC25A27O95847 323 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 RAG1P15918 1043 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 GRM5P41594 1212 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 SERPINB8P50452 374 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 CUL3Q13618 768 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 ANKRD52Q8NB46 1076 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 HAPLN3Q96S86 360 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 RBBP8Q99708 897 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 IGSF9Q9P2J2 1179 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 AKT3Q9Y243 479 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 DNAJC25-GNG10A0A024R161 153 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 F5H423 210 aaPredicted RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 ZBTB14O43829 449 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 USP2O75604 605 aaPredicted RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 CNMDO75829 334 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 ERVK-10P10266 1014 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 TXNP10599 105 aaKnown RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 PSMB4P28070 264 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 BCAT1P54687 386 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 KLF10Q13118 480 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 FRG1Q14331 258 aaKnown RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 PYROXD2Q8N2H3 581 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 PPP1R16BQ96T49 567 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 SHCBP1LQ9BZQ2 653 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 PIH1D1Q9NWS0 290 aaKnown RBP19.55■□□□□ 0.72
SDCBP-204ENST00000447182 RPS6KL1Q9Y6S9 549 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 COMMD3-BMI1R4GMX3 469 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 SRCAPQ6ZRS2 3230 aa19.55■□□□□ 0.72
SDCBP-204ENST00000447182 LOC100653049A0A140TA62 436 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 KRT34O76011 436 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 SERPINB6P35237 376 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 SPRP35270 261 aaPredicted RBP19.54■□□□□ 0.72
SDCBP-204ENST00000447182 ACADSBP45954 432 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 DLG1Q12959 904 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 VGLL4Q14135 290 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 PDK1Q15118 436 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 TRIP10Q15642 601 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 TCHHL1Q5QJ38 904 aaPredicted RBP19.54■□□□□ 0.72
SDCBP-204ENST00000447182 OGFRL1Q5TC84 451 aaPredicted RBP19.54■□□□□ 0.72
SDCBP-204ENST00000447182 NME8Q8N427 588 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 DCLK2Q8N568 766 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 GORASP1Q9BQQ3 440 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 PLEKHA5Q9HAU0 1116 aa19.54■□□□□ 0.72
SDCBP-204ENST00000447182 VCX3AQ9NNX9 186 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms