RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	LENG8	Q96PV6	779 aa	Predicted RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	CDRT15	Q96T59	188 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	IL1RL2	Q9HB29	575 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	S100A14	Q9HCY8	104 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	KCNK4	Q9NYG8	393 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	PAK5	Q9P286	719 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	GMPR2	Q9P2T1	348 aa	Known RBP	12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF212	Q9UDV6	495 aa		12.87	□□□□□ -0.35
DDR1-238	ENST00000446312	SPATA31C2	B4DYI2	1134 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	SEC24D	O94855	1032 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ZBTB7A	O95365	584 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF286B	P0CG31	522 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PTPRA	P18433	802 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PML	P29590	882 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	GMPS	P49915	693 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	MSLN	Q13421	630 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	LRRC38	Q5VT99	294 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	NAPRT	Q6XQN6	538 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	SH2D5	Q6ZV89	423 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	DHDDS	Q86SQ9	333 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	COLGALT1	Q8NBJ5	622 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CMAS	Q8NFW8	434 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PIWIL2	Q8TC59	973 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TFB1M	Q8WVM0	346 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	NLRP7	Q8WX94	980 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	SLC35B4	Q969S0	331 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	GML	Q99445	158 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CCDC106	Q9BWC9	280 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TRIM8	Q9BZR9	551 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CYP4F12	Q9HCS2	524 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	SLC39A10	Q9ULF5	831 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ADGRA2	Q96PE1	1338 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	C10orf71	Q711Q0	1435 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TMEM221	A6NGB7	291 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CLDN5	O00501	218 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	DKC1	O60832	514 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	VCL	P18206	1134 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	AKAP5	P24588	427 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	IGFBP6	P24592	240 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	HOXD12	P35452	270 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	IDH3A	P50213	366 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	COG7	P83436	770 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TFDP2	Q14188	446 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	RBM44	Q6ZP01	1051 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	DIS3L	Q8TF46	1054 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	EMID1	Q96A84	441 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	MFSD3	Q96ES6	412 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TEPSIN	Q96N21	525 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CPSF3	Q9UKF6	684 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	POMP	Q9Y244	141 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312		E7ESA3	106 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	TK2	O00142	265 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	MED7	O43513	233 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PENK	P01210	267 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	JUN	P05412	331 aa	Known RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CCDC166	P0CW27	439 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	RALB	P11234	206 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PRAME	P78395	509 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	PDK3	Q15120	406 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	LIN52	Q52LA3	116 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	EXT2	Q93063	718 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	SIGLEC10	Q96LC7	697 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ANKRD27	Q96NW4	1050 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CNPY3	Q9BT09	278 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	ADA2	Q9NZK5	511 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	CDH22	Q9UJ99	828 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	EMCN	Q9ULC0	261 aa		12.86	□□□□□ -0.35
DDR1-238	ENST00000446312	EVPL	Q92817	2033 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312		E7ENQ6	273 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	MAGEB3	O15480	346 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	FARP2	O94887	1054 aa	Predicted RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	LSM8	O95777	96 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	STIP1	P31948	543 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	FOLH1	Q04609	750 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	DCAF6	Q58WW2	860 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	GSDMB	Q8TAX9	411 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	CELF6	Q96J87	481 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	RPL10L	Q96L21	214 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	NPAS2	Q99743	824 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	EBNA1BP2	Q99848	306 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	COG4	Q9H9E3	785 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	TSC22D4	Q9Y3Q8	395 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312		V9GYQ6	96 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	ATG7	O95352	703 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	VAV1	P15498	845 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF143	P52747	638 aa	Predicted RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	OXCT1	P55809	520 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	KIZ	Q2M2Z5	673 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	SOWAHA	Q2M3V2	549 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	TRMT5	Q32P41	509 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	TEX44	Q53QW1	395 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	FBXO48	Q5FWF7	155 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	CERCAM	Q5T4B2	595 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	ZNF554	Q86TJ5	538 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	TTC30A	Q86WT1	665 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	NRDE2	Q9H7Z3	1164 aa		12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	TDRKH	Q9Y2W6	561 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-238	ENST00000446312	C2CD4B	A6NLJ0	364 aa		12.84	□□□□□ -0.35

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