RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NIPA2Q8N8Q9 360 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 OR6Y1Q8NGX8 325 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 TFAP2BQ92481 460 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 EDEM1Q92611 657 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 OPTNQ96CV9 577 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17■□□□□ 0.31
TCOF1-206ENST00000445265 PIGRP01833 764 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 MAP4P27816 1152 aaKnown RBP17■□□□□ 0.31
TCOF1-206ENST00000445265 CRHR1P34998 444 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 ABHD16BQ9H3Z7 469 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 LTFP02788 710 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 ECHS1P30084 290 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 CCR1P32246 355 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 PACS1Q6VY07 963 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 C12orf29Q8N999 325 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF555Q8NEP9 628 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 SLC35B2Q8TB61 432 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 BLOC1S5Q8TDH9 187 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 DLG3Q92796 817 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF333Q96JL9 665 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 ADNPQ9H2P0 1102 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 MLNP12872 115 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 CSE1LP55060 971 aaKnown RBP17■□□□□ 0.31
TCOF1-206ENST00000445265 ASIC4Q96FT7 647 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 FAXDC2Q96IV6 333 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 TRAPPC9Q96Q05 1148 aa17■□□□□ 0.31
TCOF1-206ENST00000445265 FAM124BQ9H5Z6 455 aaPredicted RBP17■□□□□ 0.31
TCOF1-206ENST00000445265 TMEM114B3SHH9 223 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 GPR182O15218 404 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 TPST1O60507 370 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 GOT1P17174 413 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 SNX17Q15036 470 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 PPP1R26Q5T8A7 1209 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 PIGZQ86VD9 579 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ADAM32Q8TC27 787 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 NR1H4Q96RI1 486 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 NMRK1Q9NWW6 199 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 SNUPNO95149 360 aaKnown RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 TNFAIP8O95379 198 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 DHDDSQ86SQ9 333 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 EFHBQ8N7U6 833 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 RPRD1AQ96P16 312 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ULBP1Q9BZM6 244 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ELOVL4Q9GZR5 314 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 TSR3Q9UJK0 312 aaKnown RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 GJB1P08034 283 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 GRM5P41594 1212 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 MATKP42679 507 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 RGS4P49798 205 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 PCBP1Q15365 356 aaKnown RBP eCLIP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF470Q6ECI4 717 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ZBTB49Q6ZSB9 765 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 BANPQ8N9N5 519 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 DENND2DQ9H6A0 471 aaPredicted RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 HNRNPCP07910 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 TPBGLP0DKB5 382 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 NPR3P17342 541 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 ADORA2AP29274 412 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 POU5F1Q01860 360 aaKnown RBP16.99■□□□□ 0.31
TCOF1-206ENST00000445265 C10orf120Q5SQS8 335 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 C1orf127Q8N9H9 656 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 DNAJB3Q8WWF6 145 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 LGMNQ99538 433 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 SYTL2Q9HCH5 934 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 TBC1D23Q9NUY8 699 aa16.99■□□□□ 0.31
TCOF1-206ENST00000445265 COX4I1P13073 169 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ARF4P18085 180 aaPredicted RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 NAGLUP54802 743 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 RAD51Q06609 339 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 USP6NLQ92738 828 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ZFRQ96KR1 1074 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 GPR20Q99678 358 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 GPR88Q9GZN0 384 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 PTPN1P18031 435 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 KLRC2P26717 231 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 RECQLP46063 649 aaPredicted RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 POU4F1Q01851 419 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 UBAP2LQ14157 1087 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 HSDL1Q3SXM5 330 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 STRADAQ7RTN6 431 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 MFN1Q8IWA4 741 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 SNX19Q92543 992 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 SLC8A2Q9UPR5 921 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 PRR5-ARHGAP8B1AHC4 643 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ALBP02768 609 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 RENBPP51606 427 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 JAG1P78504 1218 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ARHGAP8P85298 464 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ZBTB17Q13105 803 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms