RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 YWHAQP27348 245 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 RPL10AP62906 217 aaKnown RBP16.11■□□□□ 0.17
SNX13-204ENST00000444712 MTFR1Q15390 333 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 CKAP2Q8WWK9 683 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 SIGLEC10Q96LC7 697 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 C1orf74Q96LT6 269 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 ZNF180Q9UJW8 692 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 TTLL3Q9Y4R7 772 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 PCDHA11Q9Y5I1 949 aa16.11■□□□□ 0.17
SNX13-204ENST00000444712 SDR42E2A6NKP2 422 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 AP3B1O00203 1094 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 PAGE1O75459 146 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 PSMB4P28070 264 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 DDR2Q16832 855 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 KBTBD12Q3ZCT8 623 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 C1orf53Q5VUE5 145 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 NUGGCQ68CJ6 796 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 RWDD4Q6NW29 188 aaKnown RBP16.1■□□□□ 0.17
SNX13-204ENST00000444712 SLC26A11Q86WA9 606 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 LRRC6Q86X45 466 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 LRRC49Q8IUZ0 686 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 NPWQ8N729 165 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 MGARPQ8TDB4 240 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 STAMBPL1Q96FJ0 436 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 MAGEB18Q96M61 343 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 PPP1R2P1Q96PQ5 205 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 NMUR1Q9HB89 426 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 TLR8Q9NR97 1041 aaKnown RBP16.1■□□□□ 0.17
SNX13-204ENST00000444712 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 SFMBT1Q9UHJ3 866 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 PRDM4Q9UKN5 801 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 MAD1L1Q9Y6D9 718 aa16.1■□□□□ 0.17
SNX13-204ENST00000444712 MTMR11A4FU01 709 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 PSMD3O43242 534 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 ZWINTO95229 277 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 AMHP03971 560 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 IFNAR2P48551 515 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 GATMP50440 423 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 PPARDQ03181 441 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 MTM1Q13496 603 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 EFTUD2Q15029 972 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■□□□ 13.2
SNX13-204ENST00000444712 MANEALQ5VSG8 457 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 ZNF784Q8NCA9 323 aaPredicted RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 FBXO32Q969P5 355 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 MRRFQ96E11 262 aaKnown RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 SCLYQ96I15 445 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 PGLYRP2Q96PD5 576 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 SIK2Q9H0K1 926 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 GBA3Q9H227 469 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 KRT37O76014 449 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 VIMP08670 466 aaKnown RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 SRGAP2BP0DMP2 458 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 CCNCP24863 283 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 RFC2P35250 354 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 SPARCL1Q14515 664 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 PRPSAP1Q14558 356 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 TEX44Q53QW1 395 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 TTC39BQ5VTQ0 682 aaPredicted RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 CNKSR3Q6P9H4 555 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 UNC5AQ6ZN44 842 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 AGGF1Q8N302 714 aaeCLIP16.09■□□□□ 0.17
SNX13-204ENST00000444712 ANKS4BQ8N8V4 417 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 ATP6V0D2Q8N8Y2 350 aa16.09■□□□□ 0.17
SNX13-204ENST00000444712 FCRL2Q96LA5 508 aaPredicted RBP16.09■□□□□ 0.17
SNX13-204ENST00000444712 CARNS1A5YM72 827 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 TM9SF1O15321 606 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 KIAA0754O94854 1291 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 SUN1O94901 812 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 AP2A1O95782 977 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 CA4P22748 312 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 DNAJB2P25686 324 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 ALDH7A1P49419 539 aaKnown RBP16.08■□□□□ 0.16
SNX13-204ENST00000444712 SERPINB9P50453 376 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 CCL23P55773 120 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 ARPP19P56211 112 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 TBX4P57082 545 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 FAAP100Q0VG06 881 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 NAB1Q13506 487 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 IKBKEQ14164 716 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 LRRC14Q15048 493 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 MGAT5BQ3V5L5 792 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 STEAP4Q687X5 459 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 TIGD7Q6NT04 549 aaPredicted RBP16.08■□□□□ 0.16
SNX13-204ENST00000444712 ATPAF2Q8N5M1 289 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 MTBPQ96DY7 904 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 SLC39A13Q96H72 371 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
SNX13-204ENST00000444712 GMIPQ9P107 970 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 NUP205Q92621 2012 aa16.08■□□□□ 0.16
SNX13-204ENST00000444712 WASH4PA8MWX3 477 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms