RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 SP9P0CG40 484 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 PABPC1P11940 636 aaKnown RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 POLR2EP19388 210 aaKnown RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 NTSR1P30989 418 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 HOXA6P31267 233 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 KIR2DL1P43626 348 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 DGKEP52429 567 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ATXN1P54253 815 aaKnown RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 GALCP54803 685 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CDH4P55283 916 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 HDAC4P56524 1084 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 SATB1Q01826 763 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 NRG1Q02297 640 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 MESP2Q0VG99 397 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 TCF15Q12870 199 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF177Q13360 481 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 GEN1Q17RS7 908 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ASTE1Q2TB18 679 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 C5orf22Q49AR2 442 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 EFHC2Q5JST6 749 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 SH3PXD2AQ5TCZ1 1133 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 FBXL22Q6P050 247 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 SCYL2Q6P3W7 929 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CCDC170Q8IYT3 715 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CCAR2Q8N163 923 aaKnown RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CFAP52Q8N1V2 620 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 IL17RCQ8NAC3 791 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ATOH1Q92858 354 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 P2RY11Q96G91 374 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 PANX2Q96RD6 677 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CHP1Q99653 195 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CIPCQ9C0C6 399 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 THAP2Q9H0W7 228 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 POLMQ9NP87 494 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 LUC7LQ9NQ29 371 aaKnown RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 PLA2G4CQ9UP65 541 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ATG2BQ96BY7 2078 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 DOCK4Q8N1I0 1966 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 WDR87Q6ZQQ6 2873 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 IGLV3-10A0A075B6K4 115 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 CCDC163A0A0D9SF12 145 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 DRGXA6NNA5 263 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 PRRT4C9JH25 899 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 E9PAM4 449 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 SRGAP2O75044 1071 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 ALDH1A2O94788 518 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 ASLP04424 464 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 TMEM253P0C7T8 217 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 HLA-FP30511 346 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 CYLC1P35663 651 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 SCAPQ12770 1279 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 PIGHQ14442 188 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 SFTPA1Q8IWL2 248 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 CHPFQ8IZ52 775 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 MAML2Q8IZL2 1156 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 ALLCQ8N6M5 410 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 TXNDC5Q8NBS9 432 aaKnown RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 IGSF8Q969P0 613 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 NUP85Q9BW27 656 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 ZYG11BQ9C0D3 744 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
HDAC6-211ENST00000443563 OR12D3Q9UGF7 316 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 IP6K2Q9UHH9 426 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 CLEC4EQ9ULY5 219 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
HDAC6-211ENST00000443563 EIF3CLB5ME19 914 aaKnown RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 MYO1FO00160 1098 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 PRPSAP2O60256 369 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 APBB3O95704 486 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 HTR7P34969 479 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 PCK1P35558 622 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ST8SIA6P61647 398 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 OGDHQ02218 1023 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 SULT2A1Q06520 285 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 LMAN2Q12907 356 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 STARD3Q14849 445 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 CRY1Q16526 586 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 EGFLAMQ63HQ2 1017 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 MBLAC2Q68D91 279 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 PKN3Q6P5Z2 889 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 LONP2Q86WA8 852 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 TMTC1Q8IUR5 882 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF683Q8IZ20 524 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 CCDC33Q8N5R6 958 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 CCDC185Q8N715 623 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 NIPA2Q8N8Q9 360 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 TSTD1Q8NFU3 115 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms