RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 DSEQ9UL01 958 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CA5BQ9Y2D0 317 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PCDHB3Q9Y5E6 796 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 PCDHGA3Q9Y5H0 932 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 CSNK1G3Q9Y6M4 447 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 RYR3Q15413 4870 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 FER1L5A0AVI2 2057 aa7.56□□□□□ -1.2
SSXP3-201ENST00000442971 KMT2CQ8NEZ4 4911 aaKnown RBP7.56□□□□□ -1.2
SSXP3-201ENST00000442971 A0A1W2PP55 124 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 RCCD1A6NED2 376 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 C19orf84I3L1E1 186 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 FANCGO15287 622 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 RNASEH2AO75792 299 aaKnown RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 FURINP09958 794 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 RLBP1P12271 317 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 RECQLP46063 649 aaPredicted RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 USP46P62068 366 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 PPP2CBP62714 309 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 PPP2CAP67775 309 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 ARID5AQ03989 594 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 EIF4HQ15056 248 aaKnown RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 POM121L1PQ3SYA9 428 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 PAPD7Q5XG87 772 aaKnown RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 MRGPRGQ86SM5 289 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 SCN4BQ8IWT1 228 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 SDR16C5Q8N3Y7 309 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF808Q8N4W9 903 aaPredicted RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 EXOC6Q8TAG9 804 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 LEO1Q8WVC0 666 aaPredicted RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 NRGNQ92686 78 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 IL12RB2Q99665 862 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 LXNQ9BS40 222 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 CPEB1Q9BZB8 566 aaKnown RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 C6orf50Q9HD87 102 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 DNAJC28Q9NX36 388 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 PADI4Q9UM07 663 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 DMTF1Q9Y222 760 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 PCDHGA9Q9Y5G4 932 aaKnown RBP7.55□□□□□ -1.2
SSXP3-201ENST00000442971 AKAP6Q13023 2319 aa7.55□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3DA0A087WVF3 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3IA0A087WXS9 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3EA0A087X179 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3KA0A087X1G2 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 A6NCN8 305 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3FA6NER0 549 aaPredicted RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3LB9A6J9 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 PRAMEF26H0Y7S4 382 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TPP1O14773 563 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 PPEF2O14830 753 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 EDIL3O43854 480 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 RTN3O95197 1032 aaPredicted RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 KRT19P08727 400 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3HP0C7X1 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 IRF1P10914 325 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 MAP4P27816 1152 aaKnown RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 MAT2AP31153 395 aaKnown RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 NUDT1P36639 197 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 KIR3DL1P43629 444 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 FOXM1Q08050 763 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 C16orf72Q14CZ0 275 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 FNDC3BQ53EP0 1204 aaKnown RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 DCAF10Q5QP82 559 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3GQ6DHY5 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3CQ6IPX1 549 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 BHLHB9Q6PI77 547 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 LINGO4Q6UY18 593 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 ANKS1BQ7Z6G8 1248 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TBC1D3Q8IZP1 549 aaPredicted RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 NLGN4XQ8N0W4 816 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 NLGN4YQ8NFZ3 816 aaPredicted RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 OR14C36Q8NHC7 312 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 BARD1Q99728 777 aaKnown RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 OMDQ99983 421 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 LRRN3Q9H3W5 708 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 AKAP7Q9P0M2 348 aaPredicted RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 PILRAQ9UKJ1 303 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 FZD4Q9ULV1 537 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 TNFSF13BQ9Y275 285 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF451Q9Y4E5 1061 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 B3GALT1Q9Y5Z6 326 aa7.54□□□□□ -1.2
SSXP3-201ENST00000442971 MRPS18BQ9Y676 258 aaKnown RBP7.54□□□□□ -1.2
SSXP3-201ENST00000442971 MID1O15344 667 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 AQP9O43315 295 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 TIMM44O43615 452 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 PHACTR2O75167 634 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 STSP08842 583 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 CYP3A5P20815 502 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 PAX3P23760 479 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 NFKBIAP25963 317 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 ADPRHP54922 357 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 TSPY1Q01534 308 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 FOLH1Q04609 750 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 SPAG1Q07617 926 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 PDE4CQ08493 712 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms