RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KCNA4P22459 653 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A3P35503 534 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A5P35504 534 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 IDH3AP50213 366 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 NUDT2P50583 147 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 PPP2R5DQ14738 602 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 BHLHE22Q8NFJ8 381 aaPredicted RBP17.22■□□□□ 0.35
PMS1-213ENST00000441310 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
PMS1-213ENST00000441310 MRPL47Q9HD33 250 aaKnown RBP17.22■□□□□ 0.35
PMS1-213ENST00000441310 AGTPBP1Q9UPW5 1226 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 EDN1P05305 212 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 FGFR3P22607 806 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 HSPA13P48723 471 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 THOP1P52888 689 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 NOL9Q5SY16 702 aaKnown RBP17.22■□□□□ 0.35
PMS1-213ENST00000441310 PPP1R2P3Q6NXS1 205 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 CDR2LQ86X02 465 aaPredicted RBP17.22■□□□□ 0.35
PMS1-213ENST00000441310 UNC45BQ8IWX7 931 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 CHST13Q8NET6 341 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 HAPLN2Q9GZV7 340 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 DRC3Q9H069 523 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 FBXO40Q9UH90 709 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 MYRFQ9Y2G1 1151 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 C7orf72A4D263 438 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 KLHL41O60662 606 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 L1CAMP32004 1257 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 CYP2A13Q16696 494 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 ZNF829Q3KNS6 432 aaPredicted RBP17.21■□□□□ 0.35
PMS1-213ENST00000441310 ZBTB33Q86T24 672 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 GPR180Q86V85 440 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 CHERPQ8IWX8 916 aaKnown RBP17.21■□□□□ 0.35
PMS1-213ENST00000441310 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 FAM71DQ8N9W8 422 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.35
PMS1-213ENST00000441310 CDRT15Q96T59 188 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 PCYT2Q99447 389 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 TMEM79Q9BSE2 394 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 GIPC1O14908 333 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 ATE1O95260 518 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 ARIH2O95376 493 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 PRDX6P30041 224 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 SLC1A6P48664 564 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 CDK18Q07002 472 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 TFDP3Q5H9I0 405 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 MYO1HQ8N1T3 1032 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 TRAPPC12Q8WVT3 735 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 COPS5Q92905 334 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.35
PMS1-213ENST00000441310 ARHGAP28Q9P2N2 729 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 STK39Q9UEW8 545 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 PTPRJQ12913 1337 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 WDR81Q562E7 1941 aa17.21■□□□□ 0.35
PMS1-213ENST00000441310 DGKIO75912 1065 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 GJB1P08034 283 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 P4HA1P13674 534 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 TCN1P20061 433 aaPredicted RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 TCF7P36402 384 aaPredicted RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 STAT5BP51692 787 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 PSMC1P62191 440 aaKnown RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 PTAR1Q7Z6K3 402 aaPredicted RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 SLC35B2Q8TB61 432 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.34
PMS1-213ENST00000441310 NR2E3Q9Y5X4 410 aa17.21■□□□□ 0.34
PMS1-213ENST00000441310 A0A1W2PPW3 197 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 CCDC130P13994 396 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 CLCN2P51788 898 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 ESRRGP62508 458 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 HSDL1Q3SXM5 330 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 TRIM72Q6ZMU5 477 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 KBTBD7Q8WVZ9 684 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 PPP2R3BQ9Y5P8 575 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 H3BNH8 94 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 MCF2LO15068 1137 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 FARP2O94887 1054 aaPredicted RBP17.2■□□□□ 0.34
PMS1-213ENST00000441310 CSPG5O95196 566 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 SERPINB5P36952 375 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 PRAMEP78395 509 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 BNIP3Q12983 259 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 SAPCD2Q86UD0 394 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 MFSD14AQ96MC6 490 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 PPP1R16BQ96T49 567 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 NDEL1Q9GZM8 345 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 LOXHD1Q8IVV2 1947 aa17.2■□□□□ 0.34
PMS1-213ENST00000441310 GOLGA8TH3BQL2 631 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 ZBTB14O43829 449 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 CNOT3O75175 753 aaKnown RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 CD247P20963 164 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 MS4A2Q01362 244 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 CREB5Q02930 508 aa17.19■□□□□ 0.34
PMS1-213ENST00000441310 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 ZSCAN18Q8TBC5 510 aaPredicted RBP17.19■□□□□ 0.34
PMS1-213ENST00000441310 STARD8Q92502 1023 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms