RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 DDX50Q9BQ39 737 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 KIF9Q9HAQ2 790 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RBM12Q9NTZ6 932 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 SAE1Q9UBE0 346 aaPredicted RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 ZNF510Q9Y2H8 683 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 R3HDM2Q9Y2K5 976 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 MFHAS1Q9Y4C4 1052 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 GOLGA6L10A0A0M3HER8 536 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 WASH4PA8MWX3 477 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CCDC188H7C350 402 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 APOC4-APOC2K7ER74 178 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 TRDMT1O14717 391 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 FGF10O15520 208 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PHF2O75151 1096 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 APOC2P02655 101 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PECAM1P16284 738 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 RHOQP17081 205 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 TGM2P21980 687 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 OTUD4Q01804 1114 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PAFAH1B3Q15102 231 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CYP1B1Q16678 543 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 FAM78AQ5JUQ0 283 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 BBS7Q8IWZ6 715 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 FAM217AQ8IXS0 508 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CPXM2Q8N436 756 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CELF5Q8N6W0 485 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 SMRP1Q8NCR6 262 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 C1orf54Q8WWF1 131 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 ATG4AQ8WYN0 398 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 P3H4Q92791 437 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 ASB16Q96NS5 453 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 FAM118BQ9BPY3 351 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 ZYG11BQ9C0D3 744 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CATSPERBQ9H7T0 1116 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 GDE1Q9NZC3 331 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CD207Q9UJ71 328 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 CDH7Q9ULB5 785 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 ZFP37Q9Y6Q3 630 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 NUP210Q8TEM1 1887 aaPredicted RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 SZT2Q5T011 3432 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PRRC2BQ5JSZ5 2229 aaKnown RBP10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 TRIOBPQ9H2D6 2365 aa10.6□□□□□ -0.71
AP004290.1-201ENST00000440915 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 GFRA2O00451 464 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 TSPAN3O60637 253 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 CNTN5O94779 1100 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 FOSL2P15408 326 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 COILP38432 576 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 VIPR2P41587 438 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 IRAK1P51617 712 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 SGSHP51688 502 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 GBE1Q04446 702 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 SLC10A2Q12908 348 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 PDAP1Q13442 181 aaKnown RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 SNX1Q13596 522 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 NOMO1Q15155 1222 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 CCNG2Q16589 344 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 ALFQ53S48 1182 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 RABGAP1LQ5R372 815 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 NLRP14Q86W24 1093 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 CIR1Q86X95 450 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 KLHL7Q8IXQ5 586 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 MMGT1Q8N4V1 131 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 DEFB123Q8N688 67 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 RTL3Q8N8U3 475 aaKnown RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 ACTL9Q8TC94 416 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 SMARCD2Q92925 531 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 RSPRY1Q96DX4 576 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 MYADMQ96S97 322 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 KRT12Q99456 494 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 FRMD8P1Q9BZ68 369 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 DDX47Q9H0S4 455 aaKnown RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 LRRC19Q9H756 370 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 HOMER3Q9NSC5 361 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 TMEM248Q9NWD8 314 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 MPP6Q9NZW5 540 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 USP15Q9Y4E8 981 aaPredicted RBP10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 HEY1Q9Y5J3 304 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 MYO9BQ13459 2157 aa10.59□□□□□ -0.71
AP004290.1-201ENST00000440915 H3BQ06 376 aaPredicted RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 LIASO43766 372 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 MFSD11O43934 449 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 FCARP24071 287 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 CHRNA3P32297 505 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 CHKAP35790 457 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 NR2C2P49116 596 aa10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 EIF3EP60228 445 aaKnown RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 TTC39BQ5VTQ0 682 aaPredicted RBP10.58□□□□□ -0.72
AP004290.1-201ENST00000440915 TTC27Q6P3X3 843 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms