RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 SGK2Q9HBY8 427 aa12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 SCML1Q9UN30 329 aa12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 NCKAP1Q9Y2A7 1128 aa12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 CACNA1GO43497 2377 aa12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 LAMA5O15230 3695 aa12.06□□□□□ -0.48
UBE2D4-204ENST00000440899 CABIN1Q9Y6J0 2220 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 BIN1O00499 593 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 CAPN9O14815 690 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 MED7O43513 233 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 RNASEH1O60930 286 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 FGFR1OPO95684 399 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 KRT5P13647 590 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 CD27P26842 260 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 CSKP41240 450 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 GRIA4P48058 902 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 RPS24P62847 133 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 PAK1Q13153 545 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 ARID5BQ14865 1188 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 HNRNPA1L2Q32P51 320 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 MS4A13Q5J8X5 152 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 DENND1BQ6P3S1 775 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 USP30Q70CQ3 517 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 ENOSF1Q7L5Y1 443 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 CARNMT1Q8N4J0 409 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 PNPLA1Q8N8W4 532 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 ADAM32Q8TC27 787 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 BIRC7Q96CA5 298 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 MYO19Q96H55 970 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 PRICKLE1Q96MT3 831 aaPredicted RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 SRRTQ9BXP5 876 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 SLC4A5Q9BY07 1137 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 UBE2TQ9NPD8 197 aaPredicted RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 KIAA1522Q9P206 1035 aaPredicted RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 INTS6Q9UL03 887 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 NAALADL1Q9UQQ1 740 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 ANKRD6Q9Y2G4 727 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
UBE2D4-204ENST00000440899 FLRT2O43155 660 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SIN3BO75182 1162 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 FSBPO95073 299 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 LETM1O95202 739 aaPredicted RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MOCS3O95396 460 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MOCS2O96007 188 aaPredicted RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 APOEP02649 317 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SRPRAP08240 638 aaKnown RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 STX17P56962 302 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 YWHAZP63104 245 aaKnown RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 CDH18Q13634 790 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 KIF19Q2TAC6 998 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 DCAF6Q58WW2 860 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 PITRM1Q5JRX3 1037 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SYPL2Q5VXT5 272 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 TMEM110Q86TL2 294 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SLCO6A1Q86UG4 719 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 CFAP52Q8N1V2 620 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 GANCQ8TET4 914 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MYEOVQ96EZ4 313 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 BTN2A3PQ96KV6 586 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MRGPRX3Q96LB0 322 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 FAM81BQ96LP2 452 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MED15Q96RN5 788 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 PABPC3Q9H361 631 aaKnown RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 MTG2Q9H4K7 406 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 THAP9Q9H5L6 903 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 POPDC2Q9HBU9 364 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 FBXL12Q9NXK8 326 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 ERVW-1Q9UQF0 538 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SNX11Q9Y5W9 270 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 SLCO1B1Q9Y6L6 691 aa12.04□□□□□ -0.48
UBE2D4-204ENST00000440899 NBEAQ8NFP9 2946 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 EDDM13A0A1B0GTR0 161 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 TARSL2A2RTX5 802 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 E5RJQ4 531 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 PAPSS1O43252 624 aaPredicted RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 THAP12O43422 761 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 LUC7L3O95232 432 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 GNA15P30679 374 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 ECT2LQ008S8 904 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 SLC12A1Q13621 1099 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 CST6Q15828 149 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 FSCBQ5H9T9 825 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 C9orf64Q5T6V5 341 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 CCNI2Q6ZMN8 369 aaPredicted RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 MMS22LQ6ZRQ5 1243 aa12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 DHX40Q8IX18 779 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-204ENST00000440899 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms