RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 CLCN1P35523 988 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 CSKP41240 450 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 RPS14P62263 151 aaKnown RBP17.4■□□□□ 0.38
COL16A1-204ENST00000440437 ZBTB16Q05516 673 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 GRIK2Q13002 908 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 TPD52L1Q16890 204 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-204ENST00000440437 PITRM1Q5JRX3 1037 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 FAM183BPQ6ZVS7 135 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 FAM124AQ86V42 546 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 CHSY1Q86X52 802 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 FAM114A1Q8IWE2 563 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 LGI2Q8N0V4 545 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 DEFB106AQ8N104 65 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 KDM1BQ8NB78 822 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 C1orf131Q8NDD1 294 aaKnown RBP17.4■□□□□ 0.38
COL16A1-204ENST00000440437 C1orf216Q8TAB5 229 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 PPP1R13BQ96KQ4 1090 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 PRMT1Q99873 361 aaKnown RBP17.4■□□□□ 0.38
COL16A1-204ENST00000440437 NDST4Q9H3R1 872 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
COL16A1-204ENST00000440437 SUN2Q9UH99 717 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 DNAJC12Q9UKB3 198 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 ITIH6Q6UXX5 1313 aa17.4■□□□□ 0.38
COL16A1-204ENST00000440437 CACNA1BQ00975 2339 aa17.39■□□□□ 0.38
COL16A1-204ENST00000440437 HSF2BPO75031 334 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 PTK2Q05397 1052 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 FOXC1Q12948 553 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 ARID5BQ14865 1188 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 HNRNPA1L2Q32P51 320 aaKnown RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 PTPN20Q4JDL3 420 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 ZNF776Q68DI1 518 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 OLFML1Q6UWY5 402 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 ATP6V0D2Q8N8Y2 350 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 TUBGCP2Q9BSJ2 902 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 ZDHHC5Q9C0B5 715 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 RSPH9Q9H1X1 276 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 EIF2B4Q9UI10 523 aaKnown RBP17.39■□□□□ 0.37
COL16A1-204ENST00000440437 FRYQ5TBA9 3013 aa17.39■□□□□ 0.37
COL16A1-204ENST00000440437 USP24Q9UPU5 2620 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 KCNU1A8MYU2 1149 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 FOXN3O00409 490 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-204ENST00000440437 TOP3BO95985 862 aaKnown RBP17.38■□□□□ 0.37
COL16A1-204ENST00000440437 DNTTP04053 509 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 ERBB2P04626 1255 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 CTSOP43234 321 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-204ENST00000440437 ST8SIA6P61647 398 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 CDK17Q00537 523 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 SLC14A1Q13336 389 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 ST3GAL2Q16842 350 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 VWA3BQ502W6 1294 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 SLC47A2Q86VL8 602 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 CCDC117Q8IWD4 279 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-204ENST00000440437 FAM71AQ8IYT1 594 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 MIR1-1HGQ9H1L0 117 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 FAM204AQ9H8W3 233 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 KIAA1522Q9P206 1035 aaPredicted RBP17.38■□□□□ 0.37
COL16A1-204ENST00000440437 ERVW-1Q9UQF0 538 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 SLCO1B1Q9Y6L6 691 aa17.38■□□□□ 0.37
COL16A1-204ENST00000440437 F5H5T6 163 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 H0Y626 953 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 BCAT2O15382 392 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SIN3BO75182 1162 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 DAB1O75553 588 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 GRAP2O75791 330 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SLC2A3P11169 496 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 PRKCSHP14314 528 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 BNC1Q01954 994 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 KCNMA1Q12791 1236 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 TTC31Q49AM3 519 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 HSP90AA4PQ58FG1 418 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 OR6B2Q6IFH4 312 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SLC26A9Q7LBE3 791 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 CIR1Q86X95 450 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 APCDD1Q8J025 514 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 ZNF397Q8NF99 534 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 BTBD1Q9H0C5 482 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 DDIT4Q9NX09 232 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 DACH1Q9UI36 760 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SCML1Q9UN30 329 aa17.37■□□□□ 0.37
COL16A1-204ENST00000440437 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-204ENST00000440437 SPAARA0A1B0GVQ0 90 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 MOCS3O95396 460 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 SEMA4FO95754 770 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 SPINK2P20155 84 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 ABCB4P21439 1286 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 CCR1P32246 355 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 CDH5P33151 784 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-204ENST00000440437 KRT9P35527 623 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 FAM193AP78312 1265 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 C9orf64Q5T6V5 341 aa17.36■□□□□ 0.37
COL16A1-204ENST00000440437 TTC39BQ5VTQ0 682 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms