RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CENPCQ03188 943 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 SF3A2Q15428 464 aaKnown RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 PTPRNQ16849 979 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 FBXL22Q6P050 247 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 SND1Q7KZF4 910 aaKnown RBP eCLIP14.2□□□□□ -0.14
LTBR-202ENST00000440421 LPCAT2Q7L5N7 544 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 CACUL1Q86Y37 369 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 TMEFF1Q8IYR6 380 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 DEFB119Q8N690 84 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 EMC1Q8N766 993 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 LMLNQ96KR4 655 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 CFAP57Q96MR6 1250 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 MKRN2Q9H000 416 aaKnown RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 TKTL2Q9H0I9 626 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 PRDM16Q9HAZ2 1276 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 TMEM59LQ9UK28 342 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 INTS6Q9UL03 887 aaKnown RBP14.2□□□□□ -0.14
LTBR-202ENST00000440421 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 CYP8B1Q9UNU6 501 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 PCDHGA5Q9Y5G8 931 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 HS3ST4Q9Y661 456 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 ABCA7Q8IZY2 2146 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 WDR87Q6ZQQ6 2873 aa14.2□□□□□ -0.14
LTBR-202ENST00000440421 ZNF217O75362 1048 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 GJB6O95452 261 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 ADCY5O95622 1261 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 DLDP09622 509 aaKnown RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 UNGP13051 313 aaPredicted RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 FERP16591 822 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 CSKP41240 450 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 CXCR3P49682 368 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 IRAK1P51617 712 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 TPM4P67936 248 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 AUHQ13825 339 aaKnown RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 CLEC16AQ2KHT3 1053 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 ZSCAN23Q3MJ62 389 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 SLC25A52Q3SY17 297 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 PITRM1Q5JRX3 1037 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 RABGAP1LQ5R372 815 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 C14orf80Q86SX3 495 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 IGSF8Q969P0 613 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 NT5C3BQ969T7 300 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 RPRD1AQ96P16 312 aaPredicted RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 AGPAT1Q99943 283 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 TMEM245Q9H330 911 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 ANLNQ9NQW6 1124 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 TMPRSS4Q9NRS4 437 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 SNX10Q9Y5X0 201 aa14.19□□□□□ -0.14
LTBR-202ENST00000440421 MUC22E2RYF6 1773 aaPredicted RBP14.19□□□□□ -0.14
LTBR-202ENST00000440421 IGHV1OR15-9A0A0B4J2B8 117 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 A0A1B0GTH6 734 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 BCLAF3A2AJT9 711 aaKnown RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 I6L893 689 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 GDF9O60383 454 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 MOCS3O95396 460 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 CAVIN2O95810 425 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 F9P00740 461 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 ZNF806P0C7X5 589 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PTGER3P43115 390 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 CTSOP43234 321 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 COPAP53621 1224 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 ATP11AP98196 1134 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 RPL6Q02878 288 aaKnown RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 PTP4A2Q12974 167 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 AASDHQ4L235 1098 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 BRMS1LQ5PSV4 323 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PLA2G2CQ5R387 149 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 TTC39BQ5VTQ0 682 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 TCEAL6Q6IPX3 200 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 CYP2U1Q7Z449 544 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 TMPRSS6Q8IU80 811 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 APCDD1Q8J025 514 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 C12orf50Q8NA57 414 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 JOSD2Q8TAC2 188 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 BAP1Q92560 729 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PIGKQ92643 395 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PRCCQ92733 491 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 TCEAL3Q969E4 200 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PGAP3Q96FM1 320 aaPredicted RBP14.18□□□□□ -0.14
LTBR-202ENST00000440421 MTG2Q9H4K7 406 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 VPS45Q9NRW7 570 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 ARHGEF38Q9NXL2 777 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 ADAM22Q9P0K1 906 aa14.18□□□□□ -0.14
LTBR-202ENST00000440421 PLXND1Q9Y4D7 1925 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 A0A1B0GVM2 712 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 TCAF2A6NFQ2 919 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 LRRC53A6NM62 1247 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PRR5-ARHGAP8B1AHC4 643 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 ASLP04424 464 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 CCDC172P0C7W6 258 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 PDGFRAP16234 1089 aa14.17□□□□□ -0.14
LTBR-202ENST00000440421 MZF1P28698 734 aaPredicted RBP14.17□□□□□ -0.14
LTBR-202ENST00000440421 RDXP35241 583 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms