RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FOXB2Q5VYV0 432 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 C4orf50Q6ZRC1 276 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 OR10T2Q8NGX3 314 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TFB1MQ8WVM0 346 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 NRG4Q8WWG1 115 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 FAM193BQ96PV7 902 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 RTP3Q9BQQ7 232 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TLE6Q9H808 572 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SCOCQ9UIL1 159 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 LRCH1Q9Y2L9 728 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 GPX6P59796 221 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 EFTUD2Q15029 972 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■■□□□ 11.7
LIMD1-202ENST00000440097 RCN1Q15293 331 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 PDK4Q16654 411 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 OTUD1Q5VV17 481 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SLC24A5Q71RS6 500 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 ZNF280BQ86YH2 543 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 C4orf33Q8N1A6 199 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 CFAP36Q96G28 342 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 CEP41Q9BYV8 373 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 PPP1R12CQ9BZL4 782 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TRABDQ9H4I3 376 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 DMAP1Q9NPF5 467 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TMLHEQ9NVH6 421 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 NUMBLQ9Y6R0 609 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 CLUHO75153 1309 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 KIAA0100Q14667 2235 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 MFSD11O43934 449 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 FYNP06241 537 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 RPA3P35244 121 aaPredicted RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 GRIK1P39086 918 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 DCLRE1AQ6PJP8 1040 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 NLRP9Q7RTR0 991 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 MTDHQ86UE4 582 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 SPATA2LQ8IUW3 424 aaPredicted RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 URGCPQ8TCY9 931 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 SCG3Q8WXD2 468 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 UROC1Q96N76 676 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 SLC2A13Q96QE2 648 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 RPL26L1Q9UNX3 145 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 IKBKGQ9Y6K9 419 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 TDRD15B5MCY1 1934 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 A0A1B0GVG6 124 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 CHADO15335 359 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 OR4Q2P0C623 313 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 GEMIN4P57678 1058 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 KCNJ11Q14654 390 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 PDCD2Q16342 344 aaPredicted RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 ARL13BQ3SXY8 428 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 LRRTM3Q86VH5 581 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 SCN4BQ8IWT1 228 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 ABI1Q8IZP0 508 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 FERMT1Q9BQL6 677 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 CADM1Q9BY67 442 aaKnown RBP14.55□□□□□ -0.08
LIMD1-202ENST00000440097 MAD1L1Q9Y6D9 718 aa14.55□□□□□ -0.08
LIMD1-202ENST00000440097 ZNF487B1APH4 448 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 KBTBD13C9JR72 458 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 PRPF4O43172 522 aaKnown RBP eCLIP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 KRT36O76013 467 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 ADRA1BP35368 520 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 TPI1P60174 286 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 MBTPS1Q14703 1052 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 SLC1A5Q15758 541 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 FAM26DQ5JW98 314 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 BSPRYQ5W0U4 402 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 DENND5BQ6ZUT9 1274 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 OTOAQ7RTW8 1153 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 RTN4RL1Q86UN2 441 aaPredicted RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 SCAMP5Q8TAC9 235 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 HTR3CQ8WXA8 447 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 NT5C3BQ969T7 300 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 WDCPQ9H6R7 721 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 NPHS2Q9NP85 383 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 RGS18Q9NS28 235 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 LNPEPQ9UIQ6 1025 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 ARHGEF37A1IGU5 675 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 STK10O94804 968 aaKnown RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 DDHD2O94830 711 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 LAMB3Q13751 1172 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 MAPRE1Q15691 268 aaKnown RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 RFX8Q6ZV50 586 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 ZNF598Q86UK7 904 aaKnown RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 SMC6Q96SB8 1091 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 ABI2Q9NYB9 513 aaPredicted RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
LIMD1-202ENST00000440097 RABGEF1Q9UJ41 708 aa14.54□□□□□ -0.08
LIMD1-202ENST00000440097 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.53□□□□□ -0.08
LIMD1-202ENST00000440097 FAM72CH0Y354 149 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 M0QZQ0 153 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 METTL18O95568 372 aa14.53□□□□□ -0.08
LIMD1-202ENST00000440097 CA4P22748 312 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms