RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FIGNQ5HY92 759 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 SFMBT2Q5VUG0 894 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 E4F1Q66K89 784 aaPredicted RBP24.43■■□□□ 1.5
VARS-217ENST00000440048 FBXL22Q6P050 247 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 MON1BQ7L1V2 547 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 BNIPLQ7Z465 357 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 CCDC117Q8IWD4 279 aaPredicted RBP24.43■■□□□ 1.5
VARS-217ENST00000440048 RLN3Q8WXF3 142 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 TMEM51Q9NW97 253 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 AIPL1Q9NZN9 384 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 THADAQ6YHU6 1953 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 CACNA1AO00555 2505 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 MUC22E2RYF6 1773 aaPredicted RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 H0Y626 953 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 I6L893 689 aaPredicted RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 POLR2EP19388 210 aaKnown RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 NDUFV2P19404 249 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 TNFAIP3P21580 790 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 PRKCHP24723 683 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 GGCXP38435 758 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 P2RY2P41231 377 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 ID4P47928 161 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 STARD3Q14849 445 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 RABGAP1LQ5R372 815 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 TTC39BQ5VTQ0 682 aaPredicted RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 C14orf80Q86SX3 495 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 CIR1Q86X95 450 aaPredicted RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 JOSD2Q8TAC2 188 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 RXFP2Q8WXD0 754 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 IGSF8Q969P0 613 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 SIK2Q9H0K1 926 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 DUSP15Q9H1R2 295 aaPredicted RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 IFNKQ9P0W0 207 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 INTS6Q9UL03 887 aaKnown RBP24.42■■□□□ 1.5
VARS-217ENST00000440048 VANGL2Q9ULK5 521 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 PLA2G4CQ9UP65 541 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 PAXBP1Q9Y5B6 917 aa24.42■■□□□ 1.5
VARS-217ENST00000440048 ZBTB24O43167 697 aaPredicted RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 ATP5BP06576 529 aaKnown RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 PDGFRAP16234 1089 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 BCKDHBP21953 392 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 RDXP35241 583 aaKnown RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 ATP11AP98196 1134 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 C1QBPQ07021 282 aaKnown RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 PTPRNQ16849 979 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 MAP7D1Q3KQU3 841 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 FNDC3BQ53EP0 1204 aaKnown RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 ACAD10Q6JQN1 1059 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 SERPINA13PQ6UXR4 307 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 CCAR2Q8N163 923 aaKnown RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 TTC17Q96AE7 1141 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 RPRD1AQ96P16 312 aaPredicted RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 NUP58Q9BVL2 599 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 TSPY26PQ9H489 355 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 HAUS4Q9H6D7 363 aa24.41■■□□□ 1.5
VARS-217ENST00000440048 KIAA1522Q9P206 1035 aaPredicted RBP24.41■■□□□ 1.5
VARS-217ENST00000440048 C2CD4BA6NLJ0 364 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 LRP3O75074 770 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 ENDOD1O94919 500 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 DLDP09622 509 aaKnown RBP24.4■■□□□ 1.5
VARS-217ENST00000440048 KRT3P12035 628 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 CSKP41240 450 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 PRKCIP41743 596 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 IRAK1P51617 712 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 CCDC14Q49A88 953 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 LRSAM1Q6UWE0 723 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 C11orf74Q86VG3 221 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 FRMD1Q8N878 549 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 C3orf20Q8ND61 904 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 LOXL4Q96JB6 756 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 SELENOOQ9BVL4 669 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 SLC6A17Q9H1V8 727 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 TMEM245Q9H330 911 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 PARD6AQ9NPB6 346 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 TMPRSS4Q9NRS4 437 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 TAS2R14Q9NYV8 317 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 SNX10Q9Y5X0 201 aa24.4■■□□□ 1.5
VARS-217ENST00000440048 A0A1B0GVM2 712 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 TCAF2A6NFQ2 919 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 SYNCRIPO60506 623 aaKnown RBP24.39■■□□□ 1.49
VARS-217ENST00000440048 RHOBTB1O94844 696 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 EPHX1P07099 455 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 HLA-EP13747 358 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 TGM1P22735 817 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 SDC4P31431 198 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 RFC1P35251 1148 aaPredicted RBP24.39■■□□□ 1.49
VARS-217ENST00000440048 SPEM2Q0P670 501 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 BYSLQ13895 437 aaKnown RBP24.39■■□□□ 1.49
VARS-217ENST00000440048 ELF2Q15723 593 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 C15orf59Q2T9L4 293 aaPredicted RBP24.39■■□□□ 1.49
VARS-217ENST00000440048 C5orf22Q49AR2 442 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 RAB6CQ53S08 254 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 PITRM1Q5JRX3 1037 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 ZNF571Q7Z3V5 609 aaPredicted RBP24.39■■□□□ 1.49
VARS-217ENST00000440048 FAM131BQ86XD5 332 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 MCOLN2Q8IZK6 566 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 SPACA7Q96KW9 195 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 MRGPRX1Q96LB2 322 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 RAB6CQ9H0N0 254 aa24.39■■□□□ 1.49
VARS-217ENST00000440048 A0A1W2PQJ5 194 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms