RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 SDE2Q6IQ49 451 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 LRRC31Q6UY01 552 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CHST9Q7L1S5 443 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 DNAAF5Q86Y56 855 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF683Q8IZ20 524 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CARNMT1Q8N4J0 409 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ALLCQ8N6M5 410 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 TXNDC5Q8NBS9 432 aaKnown RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 IGSF8Q969P0 613 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 NTAN1Q96AB6 310 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 LMLNQ96KR4 655 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CCDC42Q96M95 316 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 RETREG1Q9H6L5 497 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ABCB8Q9NUT2 735 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 C2orf42Q9NWW7 574 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ZSCAN32Q9NX65 697 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 VANGL2Q9ULK5 521 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 PCDHGA2Q9Y5H1 932 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 WDFY4Q6ZS81 3184 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CCDC163A0A0D9SF12 145 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 AKR1B10O60218 316 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 MOCS3O95396 460 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CYP1A2P05177 515 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ATP5BP06576 529 aaKnown RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 PSMA2P25787 234 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 NTSR1P30989 418 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 DGKEP52429 567 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CDH4P55283 916 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 OGDHQ02218 1023 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 NHLH1Q02575 133 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 GFPT1Q06210 699 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 SCAPQ12770 1279 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 LMAN2Q12907 356 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ACAP1Q15027 740 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 RAB6CQ53S08 254 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 EGFLAMQ63HQ2 1017 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 TMEM215Q68D42 235 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ADIPOR2Q86V24 386 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CCDC33Q8N5R6 958 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 TC2NQ8N9U0 490 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ZBTB44Q8NCP5 570 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 WFDC5Q8TCV5 224 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 PPP1R9BQ96SB3 815 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CHP1Q99653 195 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 GABRG3Q99928 467 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 CIPCQ9C0C6 399 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 RAB6CQ9H0N0 254 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 THAP2Q9H0W7 228 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 THAP10Q9P2Z0 257 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 MYO1AQ9UBC5 1043 aa12.19□□□□□ -0.46
HSPG2-206ENST00000439717 PPARGC1AQ9UBK2 798 aaKnown RBP12.19□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-206ENST00000439717 ANTXRLA6NF34 631 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 E9PAM4 449 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 SGK1O00141 431 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 ADAM23O75077 832 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 RNF8O76064 485 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 APBB3O95704 486 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 CDC25BP30305 580 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 CD70P32970 193 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 NBL1P41271 181 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 PLK1P53350 603 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 GALCP54803 685 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 ZNF177Q13360 481 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-206ENST00000439717 ENPP2Q13822 863 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 CRY1Q16526 586 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 FSCBQ5H9T9 825 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 MBLAC2Q68D91 279 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 SLFN11Q7Z7L1 901 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 WDR5BQ86VZ2 330 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 LONP2Q86WA8 852 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 CHPFQ8IZ52 775 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 CCDC185Q8N715 623 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 TSTD1Q8NFU3 115 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 TTC17Q96AE7 1141 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 SEMA4AQ9H3S1 761 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 POLMQ9NP87 494 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-206ENST00000439717 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 OR12D3Q9UGF7 316 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 EBF1Q9UH73 591 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 PLA2G4CQ9UP65 541 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 TBC1D30Q9Y2I9 924 aa12.18□□□□□ -0.46
HSPG2-206ENST00000439717 LILRB5O75023 590 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 SRGAP2O75044 1071 aa12.17□□□□□ -0.46
HSPG2-206ENST00000439717 ALDH1A2O94788 518 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms