RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 PLD5Q8N7P1 536 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 EFHBQ8N7U6 833 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 ST13P5Q8NFI4 369 aaPredicted RBP10.33□□□□□ -0.76
CBX5-202ENST00000439541 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.33□□□□□ -0.76
CBX5-202ENST00000439541 PPP2R3CQ969Q6 453 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 ZSWIM3Q96MP5 696 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 CDCA3Q99618 268 aaPredicted RBP10.33□□□□□ -0.76
CBX5-202ENST00000439541 C10orf88Q9H8K7 445 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.33□□□□□ -0.76
CBX5-202ENST00000439541 DPP7Q9UHL4 492 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 VANGL2Q9ULK5 521 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 HBS1LQ9Y450 684 aaKnown RBP10.33□□□□□ -0.76
CBX5-202ENST00000439541 MTCH2Q9Y6C9 303 aa10.33□□□□□ -0.76
CBX5-202ENST00000439541 MYO9BQ13459 2157 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 DENND4CQ5VZ89 1909 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 A0A087WUV0 522 aaPredicted RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 TRAV19A0A0A6YYK7 116 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 E9PAM4 449 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 H3BRJ5 948 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 TRDMT1O14717 391 aaKnown RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 MFSD11O43934 449 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 TJP3O95049 919 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 IGFBP4P22692 258 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 SLC6A4P31645 630 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 CETN2P41208 172 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 KCNJ1P48048 391 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 VCPP55072 806 aaKnown RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 GNGT1P63211 74 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 OTUD4Q01804 1114 aaKnown RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 GUCY2DQ02846 1103 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 RING1Q06587 406 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 CBX2Q14781 532 aaPredicted RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 MANEALQ5VSG8 457 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 NCBP2-AS2Q69YL0 99 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 RWDD4Q6NW29 188 aaKnown RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 RFWD3Q6PCD5 774 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 ELMSAN1Q6PJG2 1045 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 RTL10Q7L3V2 364 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 CHSY1Q86X52 802 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 MAP7D3Q8IWC1 876 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 TP53INP2Q8IXH6 220 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 IQCKQ8N0W5 287 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 ZNF276Q8N554 614 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 NPWQ8N729 165 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 NAP1L3Q99457 506 aaPredicted RBP10.32□□□□□ -0.76
CBX5-202ENST00000439541 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 EPB41L5Q9HCM4 733 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 DZANK1Q9NVP4 752 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 MPP6Q9NZW5 540 aa10.32□□□□□ -0.76
CBX5-202ENST00000439541 ATXN2Q99700 1313 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 GOLGA6L10A0A0M3HER8 536 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 GOLGA6L10A6NI86 522 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 SRRM3A6NNA2 597 aaPredicted RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 HMGB1P1B2RPK0 211 aaPredicted RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 CCDC188H7C350 402 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 APOL1O14791 398 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 PHF2O75151 1096 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 POU2F2P09086 479 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 EPHB2P29323 1055 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 NUMBP49757 651 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 SGSHP51688 502 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 AUHQ13825 339 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 CLUL1Q15846 466 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 FAM133BQ5BKY9 247 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 SLC9A4Q6AI14 798 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 ANKRD54Q6NXT1 300 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 FOXR1Q6PIV2 292 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 KDM7AQ6ZMT4 941 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 GET4Q7L5D6 327 aaPredicted RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 ZNF683Q8IZ20 524 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 ATP6V0D2Q8N8Y2 350 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 ACTL9Q8TC94 416 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 BCAS4Q8TDM0 211 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 IGSF8Q969P0 613 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 LRRC45Q96CN5 670 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 BTN2A3PQ96KV6 586 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 PRICKLE1Q96MT3 831 aaPredicted RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 ZIM3Q96PE6 472 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 HAPLN3Q96S86 360 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 EPAS1Q99814 870 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 MAK16Q9BXY0 300 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 DCLK3Q9C098 648 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 OSBPL2Q9H1P3 480 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 CLEC1BQ9P126 229 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 CFAP97Q9P2B7 532 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 AMACRQ9UHK6 382 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 DNPEPQ9ULA0 475 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 MRPS23Q9Y3D9 190 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 HEY1Q9Y5J3 304 aa10.31□□□□□ -0.76
CBX5-202ENST00000439541 HELZP42694 1942 aaKnown RBP10.31□□□□□ -0.76
CBX5-202ENST00000439541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.3□□□□□ -0.76
CBX5-202ENST00000439541 DCLK1O15075 740 aa10.3□□□□□ -0.76
CBX5-202ENST00000439541 DAPK3O43293 454 aa10.3□□□□□ -0.76
CBX5-202ENST00000439541 RAD51CO43502 376 aa10.3□□□□□ -0.76
CBX5-202ENST00000439541 GREM1O60565 184 aa10.3□□□□□ -0.76
CBX5-202ENST00000439541 CNTN5O94779 1100 aa10.3□□□□□ -0.76
CBX5-202ENST00000439541 SLC2A3P11169 496 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms