RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 DNTTP04053 509 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 CAPNS1P04632 268 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 HOXB3P14651 431 aaPredicted RBP18.84■□□□□ 0.61
GTF3A-204ENST00000438571 RPL34P49207 117 aaKnown RBP18.84■□□□□ 0.61
GTF3A-204ENST00000438571 GCNT1Q02742 428 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 HNRNPDQ14103 355 aaKnown RBP18.84■□□□□ 0.61
GTF3A-204ENST00000438571 E2F5Q15329 346 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 STILQ15468 1287 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 KIF19Q2TAC6 998 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 MPP7Q5T2T1 576 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 GJB7Q6PEY0 223 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
GTF3A-204ENST00000438571 HJURPQ8NCD3 748 aaPredicted RBP18.84■□□□□ 0.61
GTF3A-204ENST00000438571 BTBD1Q9H0C5 482 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 CACNA1GO43497 2377 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 CELSR3Q9NYQ7 3312 aa18.84■□□□□ 0.61
GTF3A-204ENST00000438571 P4HA2O15460 535 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 IRAK2O43187 625 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 PAPSS1O43252 624 aaPredicted RBP18.83■□□□□ 0.6
GTF3A-204ENST00000438571 FBXO21O94952 628 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 ATP5BP06576 529 aaKnown RBP18.83■□□□□ 0.6
GTF3A-204ENST00000438571 KRT5P13647 590 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 APBA1Q02410 837 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 DCAF6Q58WW2 860 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 MS4A13Q5J8X5 152 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 RAP1GAP2Q684P5 730 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 ZNF776Q68DI1 518 aaPredicted RBP18.83■□□□□ 0.6
GTF3A-204ENST00000438571 MARCH9Q86YJ5 346 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 FIBINQ8TAL6 211 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 GOLGA1Q92805 767 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 AZIN2Q96A70 460 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 TTC17Q96AE7 1141 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 SERPINB11Q96P15 392 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 PCED1AQ9H1Q7 454 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 RSPH9Q9H1X1 276 aaPredicted RBP18.83■□□□□ 0.6
GTF3A-204ENST00000438571 HOOK1Q9UJC3 728 aaKnown RBP18.83■□□□□ 0.6
GTF3A-204ENST00000438571 CNTN6Q9UQ52 1028 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 TLR6Q9Y2C9 796 aa18.83■□□□□ 0.6
GTF3A-204ENST00000438571 COL5A1P20908 1838 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 TTC34A8MYJ7 566 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 E5RJQ4 531 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 AFPP02771 609 aaKnown RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 IGHV4-34P06331 123 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 ZNF883P0CG24 379 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 NUCB2P80303 420 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 SCAPQ12770 1279 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 PITRM1Q5JRX3 1037 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 GLRX5Q86SX6 157 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 CIR1Q86X95 450 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 APCDD1Q8J025 514 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 GTPBP4Q9BZE4 634 aaKnown RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 PABPC3Q9H361 631 aaKnown RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 EBF2Q9HAK2 575 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 ARID1BQ8NFD5 2236 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-204ENST00000438571 ACACAQ13085 2346 aa18.82■□□□□ 0.6
GTF3A-204ENST00000438571 A0A1W2PP55 124 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 FAM47DPA6NHR8 397 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 MID1O15344 667 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 LUC7L3O95232 432 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 ATXN1LP0C7T5 689 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 PPP1R2P41236 205 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 AFF3P51826 1226 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 MARSP56192 900 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 IL9RQ01113 521 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 CETN1Q12798 172 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 PAK1Q13153 545 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 CDH18Q13634 790 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 TAF5Q15542 800 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 HNRNPA1L2Q32P51 320 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 TTC31Q49AM3 519 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 ZC3H12AQ5D1E8 599 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 DBX2Q6ZNG2 339 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 LGI2Q8N0V4 545 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 SLC6A18Q96N87 628 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 SRRTQ9BXP5 876 aaKnown RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 SLC4A5Q9BY07 1137 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 IRX2Q9BZI1 471 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 FBRSQ9HAH7 460 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 UBE2TQ9NPD8 197 aaPredicted RBP18.81■□□□□ 0.6
GTF3A-204ENST00000438571 SUN2Q9UH99 717 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 ERVW-1Q9UQF0 538 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 ANKRD6Q9Y2G4 727 aa18.81■□□□□ 0.6
GTF3A-204ENST00000438571 APC2O95996 2303 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 GOLGA8CPA6NN73 597 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 BECN2A8MW95 431 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 H0Y8X5 98 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 IGLV3-25P01717 112 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 TACR2P21452 398 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 RDXP35241 583 aaKnown RBP18.8■□□□□ 0.6
GTF3A-204ENST00000438571 GRIA4P48058 902 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 STK19P49842 368 aaPredicted RBP18.8■□□□□ 0.6
GTF3A-204ENST00000438571 ZBTB16Q05516 673 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 NNTQ13423 1086 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 C9orf64Q5T6V5 341 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 KIAA0895LQ68EN5 471 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 IL27RAQ6UWB1 636 aa18.8■□□□□ 0.6
GTF3A-204ENST00000438571 CHSY1Q86X52 802 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms