RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RIOX2Q8IUF8 465 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C10orf107Q8IVU9 208 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CLEC4FQ8N1N0 589 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 NIPA2Q8N8Q9 360 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 URGCPQ8TCY9 931 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 DLG3Q92796 817 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TUBGCP3Q96CW5 907 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MPP4Q96JB8 637 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 HSFY1Q96LI6 401 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 LGMNQ99538 433 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PRPF18Q99633 342 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 FICDQ9BVA6 458 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 UNKQ9C0B0 810 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MAN1C1Q9NR34 630 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PNPOQ9NVS9 261 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 BTBD7Q9P203 1132 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PACSIN3Q9UKS6 424 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 FZD1Q9UP38 647 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TJP1Q07157 1748 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 BCLAF3A2AJT9 711 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 HDAC3O15379 428 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CILPO75339 1184 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 USP1O94782 785 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 FARP2O94887 1054 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 VAPBO95292 243 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MT-CO1P00395 513 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GJB1P08034 283 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF286BP0CG31 522 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GOT1P17174 413 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TPSB2P20231 275 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ACAT1P24752 427 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 DNAJB2P25686 324 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 NOS2P35228 1153 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RGS2P41220 211 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GBE1Q04446 702 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TPSAB1Q15661 275 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C1orf220Q5T0J3 134 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RNF220Q5VTB9 566 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 LCLAT1Q6UWP7 414 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PLPPR4Q7Z2D5 763 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ARHGAP22Q7Z5H3 698 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GPR141Q7Z602 305 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CELF6Q96J87 481 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 VAT1Q99536 393 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ELOVL4Q9GZR5 314 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SDCBP2Q9H190 292 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ADNPQ9H2P0 1102 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 WDR41Q9HAD4 459 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 NKX1-2Q9UD57 310 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MAFBQ9Y5Q3 323 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MYH7BA7E2Y1 1941 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CCDC88AQ3V6T2 1871 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 MYH11P35749 1972 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SMIM31A0A1B0GVY4 71 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 KDM4FA0A1W2PPD8 638 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 KLRG2A4D1S0 409 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RGSL1A5PLK6 1076 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C16orf96A6NNT2 1141 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SUPT3HB4E1H0 165 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PTPN7P35236 360 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 KLF1Q13351 362 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SIX1Q15475 284 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TAF5Q15542 800 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PPP1R26Q5T8A7 1209 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 KIAA0319LQ8IZA0 1049 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 EFCAB3Q8N7B9 438 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C1orf127Q8N9H9 656 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ADAM32Q8TC27 787 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 WNT8BQ93098 351 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ZNF570Q96NI8 536 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 EGFL8Q99944 293 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TMEM79Q9BSE2 394 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ACE2Q9BYF1 805 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TJP2Q9UDY2 1190 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PPP2R3BQ9Y5P8 575 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SIPA1L3O60292 1781 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TNPO2O14787 897 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 UPP2O95045 317 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PGM3O95394 542 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PYGLP06737 847 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 AKAP5P24588 427 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CRABP2P29373 138 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GPX6P59796 221 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GRIK4Q16099 956 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 GALNTL6Q49A17 601 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SPOUT1Q5T280 376 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 TIGD7Q6NT04 549 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 EFL1Q7Z2Z2 1120 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CMC1Q7Z7K0 106 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ANKRD52Q8NB46 1076 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 B4GALNT2Q8NHY0 566 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CDC26Q8NHZ8 85 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 COPS5Q92905 334 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SYT11Q9BT88 431 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 IL22Q9GZX6 179 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 S100A14Q9HCY8 104 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms