RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 FAM172AQ8WUF8 416 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 MYEOVQ96EZ4 313 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 CNPY3Q9BT09 278 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 CIPCQ9C0C6 399 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 ARHGAP20Q9P2F6 1191 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 CNOT8Q9UFF9 292 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 VANGL2Q9ULK5 521 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 SCINQ9Y6U3 715 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 A0A1B0GVM2 712 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 ANTXRLA6NF34 631 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 TCAF2A6NFQ2 919 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 AKR1B15C9JRZ8 316 aaPredicted RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 SGK1O00141 431 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 PLEKP08567 350 aaPredicted RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 ADRA1BP35368 520 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 FNTBP49356 437 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 ATXN1P54253 815 aaKnown RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 ZNF177Q13360 481 aaPredicted RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 SLC12A1Q13621 1099 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 ARID5BQ14865 1188 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 CCDC122Q5T0U0 273 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 SH3PXD2AQ5TCZ1 1133 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 WDR5BQ86VZ2 330 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 ZNF653Q96CK0 615 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 HHIPQ96QV1 700 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 DEF6Q9H4E7 631 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 POLR3BQ9NW08 1133 aaPredicted RBP16.9■□□□□ 0.3
CTSD-205ENST00000438213 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 R4GN57 208 aa16.9■□□□□ 0.3
CTSD-205ENST00000438213 A0A087X0T9 212 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 PROB1E7EW31 1015 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 AP5Z1O43299 807 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ADAM23O75077 832 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 MFAP3LO75121 409 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 CLDN11O75508 207 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 FAM228BP0C875 321 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.29
CTSD-205ENST00000438213 CD70P32970 193 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 PLA2G5P39877 138 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ZNF75DP51815 510 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ADKP55263 362 aaKnown RBP16.89■□□□□ 0.29
CTSD-205ENST00000438213 LMAN2Q12907 356 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
CTSD-205ENST00000438213 C5orf22Q49AR2 442 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 MBLAC2Q68D91 279 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 SCYL2Q6P3W7 929 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 C14orf80Q86SX3 495 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
CTSD-205ENST00000438213 WFDC5Q8TCV5 224 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 NKD2Q969F2 451 aaPredicted RBP16.89■□□□□ 0.29
CTSD-205ENST00000438213 IGSF8Q969P0 613 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 NCAPGQ9BPX3 1015 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ZDHHC4Q9NPG8 344 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ANLNQ9NQW6 1124 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 ABHD10Q9NUJ1 306 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 MYO1AQ9UBC5 1043 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 HCN2Q9UL51 889 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 WDFY4Q6ZS81 3184 aa16.89■□□□□ 0.29
CTSD-205ENST00000438213 TMEM191CA6NGB0 347 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 DRGXA6NNA5 263 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 AXIN1O15169 862 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 ATMINO43313 823 aaPredicted RBP16.88■□□□□ 0.29
CTSD-205ENST00000438213 AKR1B10O60218 316 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 LILRB5O75023 590 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 SRGAP2O75044 1071 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 DLDP09622 509 aaKnown RBP16.88■□□□□ 0.29
CTSD-205ENST00000438213 HOXB2P14652 356 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 PSMA2P25787 234 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 WASP42768 502 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 CDH4P55283 916 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 HDAC4P56524 1084 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
CTSD-205ENST00000438213 STARD3Q14849 445 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 TMEM215Q68D42 235 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 TMEM92Q6UXU6 159 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 SLFN11Q7Z7L1 901 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 ADIPOR2Q86V24 386 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 DNAAF5Q86Y56 855 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 NTAN1Q96AB6 310 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 TTC17Q96AE7 1141 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 ACOX2Q99424 681 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 GABRG3Q99928 467 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 OSBPL2Q9H1P3 480 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 CACNA2D2Q9NY47 1150 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 OR12D3Q9UGF7 316 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 STON1Q9Y6Q2 735 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 KIAA1549LQ6ZVL6 1849 aa16.88■□□□□ 0.29
CTSD-205ENST00000438213 E9PAM4 449 aa16.87■□□□□ 0.29
CTSD-205ENST00000438213 I6L893 689 aaPredicted RBP16.87■□□□□ 0.29
CTSD-205ENST00000438213 CCP110O43303 1012 aa16.87■□□□□ 0.29
CTSD-205ENST00000438213 SYNCRIPO60506 623 aaKnown RBP16.87■□□□□ 0.29
CTSD-205ENST00000438213 RNF8O76064 485 aa16.87■□□□□ 0.29
CTSD-205ENST00000438213 ASLP04424 464 aa16.87■□□□□ 0.29
CTSD-205ENST00000438213 GGCXP38435 758 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms