RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 FSCBQ5H9T9 825 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 E4F1Q66K89 784 aaPredicted RBP18.4■□□□□ 0.54
NCSTN-208ENST00000438008 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.4■□□□□ 0.54
NCSTN-208ENST00000438008 KBTBD6Q86V97 674 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 DCLK2Q8N568 766 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 EMC1Q8N766 993 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 RXFP2Q8WXD0 754 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 C1orf74Q96LT6 269 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 TMEM245Q9H330 911 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 HAUS4Q9H6D7 363 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 ANLNQ9NQW6 1124 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 IFNKQ9P0W0 207 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 KIAA1522Q9P206 1035 aaPredicted RBP18.4■□□□□ 0.54
NCSTN-208ENST00000438008 PLA2G4CQ9UP65 541 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 RAD54BQ9Y620 910 aa18.4■□□□□ 0.54
NCSTN-208ENST00000438008 FAM186AA6NE01 2351 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 A0A1B0GVM2 712 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 TCRBV5S1A1TA0A578 114 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 TCAF2A6NFQ2 919 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 SIGLEC16A6NMB1 481 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 H0Y626 953 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PDGFRAP16234 1089 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 SDC4P31431 198 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PTPN9P43378 593 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 SLC12A1Q13621 1099 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 BYSLQ13895 437 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 STARD3Q14849 445 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PTPRNQ16849 979 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 MAP7D1Q3KQU3 841 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 CCDC14Q49A88 953 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PHLDB2Q86SQ0 1253 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 MCOLN2Q8IZK6 566 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 CCAR2Q8N163 923 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PGBD3Q8N328 593 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 GPR161Q8N6U8 529 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 JOSD2Q8TAC2 188 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 CENPIQ92674 756 aaPredicted RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 IGSF8Q969P0 613 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 VCPIP1Q96JH7 1222 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 HINFPQ9BQA5 517 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 DUSP15Q9H1R2 295 aaPredicted RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 INTS6Q9UL03 887 aaKnown RBP18.39■□□□□ 0.53
NCSTN-208ENST00000438008 VANGL2Q9ULK5 521 aa18.39■□□□□ 0.53
NCSTN-208ENST00000438008 PTPRZ1P23471 2315 aaPredicted RBP18.38■□□□□ 0.53
NCSTN-208ENST00000438008 DCLK1O15075 740 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 LRP3O75074 770 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 RHOBTB1O94844 696 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 ASLP04424 464 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 GZMAP12544 262 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 NDUFV2P19404 249 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 TGM1P22735 817 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 PRKCHP24723 683 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 RFC1P35251 1148 aaPredicted RBP18.38■□□□□ 0.53
NCSTN-208ENST00000438008 OXCT1P55809 520 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 KLHL30Q0D2K2 578 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 SERPINA13PQ6UXR4 307 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 STRADAQ7RTN6 431 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 ZNF571Q7Z3V5 609 aaPredicted RBP18.38■□□□□ 0.53
NCSTN-208ENST00000438008 C14orf80Q86SX3 495 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 ZNF683Q8IZ20 524 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 CYB5D2Q8WUJ1 264 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 MRGPRX1Q96LB2 322 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 RPRD1AQ96P16 312 aaPredicted RBP18.38■□□□□ 0.53
NCSTN-208ENST00000438008 HAPLN3Q96S86 360 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 SIK2Q9H0K1 926 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 CAPN11Q9UMQ6 739 aa18.38■□□□□ 0.53
NCSTN-208ENST00000438008 EP300Q09472 2414 aaPredicted RBP18.37■□□□□ 0.53
NCSTN-208ENST00000438008 DRGXA6NNA5 263 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 SYNCRIPO60506 623 aaKnown RBP18.37■□□□□ 0.53
NCSTN-208ENST00000438008 ZNF217O75362 1048 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 CLDN11O75508 207 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 EPN2O95208 641 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 MOCS3O95396 460 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 GJB6O95452 261 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 TPM3P06753 285 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 C7P10643 843 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 CSKP41240 450 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 PLK1P53350 603 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 ATP11AP98196 1134 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 ELF2Q15723 593 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 PITRM1Q5JRX3 1037 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 PPP1R15BQ5SWA1 713 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 DNAJC24Q6P3W2 148 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 WDR59Q6PJI9 974 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 METTL3Q86U44 580 aaKnown RBP18.37■□□□□ 0.53
NCSTN-208ENST00000438008 KDM1BQ8NB78 822 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 SPACA7Q96KW9 195 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 TAS2R14Q9NYV8 317 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 INVSQ9Y283 1065 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
NCSTN-208ENST00000438008 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
NCSTN-208ENST00000438008 DDX3XO00571 662 aaKnown RBP eCLIP18.36■□□□□ 0.536e-10■■□□□ 12.9
NCSTN-208ENST00000438008 EPHX1P07099 455 aa18.36■□□□□ 0.53
NCSTN-208ENST00000438008 GPD1P21695 349 aa18.36■□□□□ 0.53
NCSTN-208ENST00000438008 BCKDHBP21953 392 aa18.36■□□□□ 0.53
NCSTN-208ENST00000438008 RRM1P23921 792 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms