RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 TMCO6Q96DC7 493 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 IKZF3Q9UKT9 509 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 COQ6Q9Y2Z9 468 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PPP2R3BQ9Y5P8 575 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 IGSF9BQ9UPX0 1349 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PGRMC2O15173 223 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 IFNA7P01567 189 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 SCN1BQ07699 218 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ERFEQ4G0M1 354 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PYHIN1Q6K0P9 492 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 MSANTD1Q6ZTZ1 278 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PNPT1Q8TCS8 783 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 TPD52L3Q96J77 140 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CDRT15Q96T59 188 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ANKARQ7Z5J8 1434 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CHST10O43529 356 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 UGT2B11O75310 529 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CPSF4O95639 269 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 KLRC1P26715 233 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PKN1Q16512 942 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ADGRE3Q9BY15 652 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ST3GAL5Q9UNP4 418 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 INVSQ9Y283 1065 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ABCA8O94911 1581 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PHKG2P15735 406 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 CBX5P45973 191 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ACADVLP49748 655 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 MED11Q9P086 117 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 GABBR1Q9UBS5 961 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 SIK3Q9Y2K2 1263 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 OMPP47874 163 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 HARS2P49590 506 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 RIPK1Q13546 671 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ATP6V0D2Q8N8Y2 350 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ZNF540Q8NDQ6 660 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 RPRD1AQ96P16 312 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PIH1D3Q9NQM4 214 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 TRNAU1APQ9NX07 287 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 G3V2T6 193 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 GLP2RO95838 553 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 F9P00740 461 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 PGAM1P18669 254 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 SUZ12Q15022 739 aaKnown RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
PTCH1-209ENST00000437951 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-209ENST00000437951 ASB14A6NK59 587 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 TSHRP16473 764 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 GPR1P46091 355 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 ARCQ7LC44 396 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 KDELC2Q7Z4H8 507 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 AGAP11Q8TF27 550 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 PNPLA8Q9NP80 782 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 GDF3Q9NR23 364 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 DSEQ9UL01 958 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 SERPINF2P08697 491 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 ETFBP38117 255 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 TRIM74Q86UV6 250 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 TRIM73Q86UV7 250 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 ANKZF1Q9H8Y5 726 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 VPS45Q9NRW7 570 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 GNPTGQ9UJJ9 305 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 MTF2Q9Y483 593 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 PRG2P13727 222 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 AVPR1AP37288 418 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 ARF5P84085 180 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 FOLH1Q04609 750 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 DLG1Q12959 904 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 C1orf189Q5VU69 101 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 ITFG2Q969R8 447 aa11.75□□□□□ -0.53
PTCH1-209ENST00000437951 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 JPH1Q9HDC5 661 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-209ENST00000437951 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms