RNA–Protein interactions for RNA: ENST00000437259.5

NSMF-208, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NSMF, Length 3,577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-208ENST00000437259 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
NSMF-208ENST00000437259 MTMR10Q9NXD2 777 aa16.65■□□□□ 0.26
NSMF-208ENST00000437259 SLC7A8Q9UHI5 535 aa16.65■□□□□ 0.26
NSMF-208ENST00000437259 OCRLQ01968 901 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 DGKDQ16760 1214 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 HSF5Q4G112 596 aaPredicted RBP16.64■□□□□ 0.26
NSMF-208ENST00000437259 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 RNF135Q8IUD6 432 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 KRT82Q9NSB4 513 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 IARS2Q9NSE4 1012 aaKnown RBP16.64■□□□□ 0.26
NSMF-208ENST00000437259 SCOCQ9UIL1 159 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 PPME1Q9Y570 386 aa16.64■□□□□ 0.26
NSMF-208ENST00000437259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.64■□□□□ 0.25
NSMF-208ENST00000437259 PHGDHO43175 533 aaKnown RBP16.64■□□□□ 0.25
NSMF-208ENST00000437259 SMNDC1O75940 238 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■□□ 18.3
NSMF-208ENST00000437259 TAF6P49848 677 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 IRF9Q00978 393 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 SOX4Q06945 474 aaPredicted RBP16.64■□□□□ 0.25
NSMF-208ENST00000437259 DPYSL2Q16555 572 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 CCNYL1Q8N7R7 359 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 TEKT4Q8WW24 435 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 RHOBTB2Q9BYZ6 727 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 BFARQ9NZS9 450 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 GCATO75600 419 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 TGDSO95455 350 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 CRHR1P34998 444 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 CCR10P46092 362 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 AP1ARQ63HQ0 302 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 DEFB107AQ8IZN7 70 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 FRMD8Q9BZ67 464 aaPredicted RBP16.64■□□□□ 0.25
NSMF-208ENST00000437259 ULBP1Q9BZM6 244 aa16.64■□□□□ 0.25
NSMF-208ENST00000437259 UBQLN1Q9UMX0 589 aaKnown RBP16.64■□□□□ 0.25
NSMF-208ENST00000437259 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 FAM159BA6NKW6 160 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 DFFAO00273 331 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 JCHAINP01591 159 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 ERCC2P18074 760 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TCN1P20061 433 aaPredicted RBP16.63■□□□□ 0.25
NSMF-208ENST00000437259 EFHC1Q5JVL4 640 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 THEMIS2Q5TEJ8 643 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PLD6Q8N2A8 252 aaKnown RBP16.63■□□□□ 0.25
NSMF-208ENST00000437259 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TMEM40Q8WWA1 233 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 QKIQ96PU8 341 aaKnown RBP eCLIP16.63■□□□□ 0.25
NSMF-208ENST00000437259 VCXQ9H320 206 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 MEIS3P2A8K0S8 358 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 CPA3P15088 417 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TSHRP16473 764 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 GARSP41250 739 aaKnown RBP16.63■□□□□ 0.25
NSMF-208ENST00000437259 MATKP42679 507 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 GRAMD1BQ3KR37 738 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 SLC26A9Q7LBE3 791 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 C7orf26Q96N11 449 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PANX3Q96QZ0 392 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 CHRAC1Q9NRG0 131 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PIGVQ9NUD9 493 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PPM1HQ9ULR3 514 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 STAP1Q9ULZ2 295 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 LRRC42Q9Y546 428 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TRAFD1O14545 582 aaPredicted RBP16.63■□□□□ 0.25
NSMF-208ENST00000437259 GLRA3O75311 464 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 AP2B1P63010 937 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 ASPHQ12797 758 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 SNAPC2Q13487 334 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 PDK1Q15118 436 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 RABGAP1LQ5R372 815 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 MARCH8Q5T0T0 291 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TTC39CQ8N584 583 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 ZNF333Q96JL9 665 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 SNX27Q96L92 541 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 TASP1Q9H6P5 420 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 WDR55Q9H6Y2 383 aaPredicted RBP16.63■□□□□ 0.25
NSMF-208ENST00000437259 SIRPGQ9P1W8 387 aa16.63■□□□□ 0.25
NSMF-208ENST00000437259 OPHN1O60890 802 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
NSMF-208ENST00000437259 SPDYAQ5MJ70 313 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 LPCAT4Q643R3 524 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 SH3TC2Q8TF17 1288 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 LPPQ93052 612 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 LRRC39Q96DD0 335 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 TSNARE1Q96NA8 513 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 SNX15Q9NRS6 342 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 ZNF180Q9UJW8 692 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 TREHO43280 583 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 COPAP53621 1224 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
NSMF-208ENST00000437259 SEPT6Q14141 434 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 CCL15Q16663 113 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 DCAF4L1Q3SXM0 396 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 MCUQ8NE86 351 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 CERS2Q96G23 380 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
NSMF-208ENST00000437259 PLA2G4CQ9UP65 541 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms