RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RASSF2P50749 326 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 ERVFC1-1P60608 527 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 GPS2Q13227 327 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 KRT27Q7Z3Y8 459 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 GPSM1Q86YR5 675 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 CADM3Q8N126 398 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 JDP2Q8WYK2 163 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 GRAMD1AQ96CP6 724 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 LRRC46Q96FV0 321 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZNF347Q96SE7 839 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 UNKQ9C0B0 810 aaKnown RBP3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZNF556Q9HAH1 456 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 PNPLA8Q9NP80 782 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 KLHL42Q9P2K6 505 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 DDX20Q9UHI6 824 aaKnown RBP3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 G3BP2Q9UN86 482 aaKnown RBP3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 SNX13Q9Y5W8 968 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 CECR2Q9BXF3 1484 aa3.65□□□□□ -1.83
HMGB1P31-201ENST00000437242 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 SMTNL1A8MU46 457 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 BECN2A8MW95 431 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PRSS2P07478 247 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 ARSBP15848 533 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 SLC37A1P57057 533 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 Q0VFX4 171 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PMPCAQ10713 525 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 OTUD1Q5VV17 481 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 USP17L6PQ6QN14 398 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PRSS57Q6UWY2 283 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PIK3AP1Q6ZUJ8 805 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 KDELC2Q7Z4H8 507 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 CCDC28AQ8IWP9 274 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PAQR4Q8N4S7 273 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 SRFBP1Q8NEF9 429 aaKnown RBP3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 ZNF419Q96HQ0 510 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 PCGF6Q9BYE7 350 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 FBXO28Q9NVF7 368 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 TCEAL9Q9UHQ7 104 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 THRAP3Q9Y2W1 955 aaKnown RBP3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 CKAP5Q14008 2032 aa3.64□□□□□ -1.83
HMGB1P31-201ENST00000437242 NACADO15069 1562 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 DDNO94850 711 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 SCGB1D2O95969 90 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 DSC1Q08554 894 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 ATP1A4Q13733 1029 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 DAG1Q14118 895 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 NFE2Q16621 373 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 ALG10Q5BKT4 473 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 ALG10BQ5I7T1 473 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 DNTTIP2Q5QJE6 756 aaKnown RBP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 C9orf57Q5W0N0 161 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 C16orf89Q6UX73 402 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 SLC16A12Q6ZSM3 486 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 CREB3L2Q70SY1 520 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 MAGEB6Q8N7X4 407 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 CCDC150Q8NCX0 1101 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 ADPRHL1Q8NDY3 354 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 GABPB2Q8TAK5 448 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 KAT2AQ92830 837 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 MAGEB5Q9BZ81 275 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 MAGEH1Q9H213 219 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 KCNG2Q9UJ96 466 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 UBE2J1Q9Y385 318 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 PCDHB7Q9Y5E2 793 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 EID1Q9Y6B2 187 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 SCN5AQ14524 2016 aa3.63□□□□□ -1.83
HMGB1P31-201ENST00000437242 CLEC18AA5D8T8 446 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CLCA1A8K7I4 914 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 M0QZQ0 153 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 NTN3O00634 580 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 VIPP01282 170 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 LCATP04180 440 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 MYL4P12829 197 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 IDEP14735 1019 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CLCN5P51795 746 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 COASYQ13057 564 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 GALNT3Q14435 633 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 FAM76BQ5HYJ3 339 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 ENTPD8Q5MY95 495 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 FNBP1LQ5T0N5 605 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 ATG9BQ674R7 924 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 NXNQ6DKJ4 435 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CHST15Q7LFX5 561 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 TCEAL8Q8IYN2 117 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CLEC18CQ8NCF0 446 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CATSPERBQ9H7T0 1116 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 PLEKHB1Q9UF11 243 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 CORO2BQ9UQ03 480 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 PCDHGB6Q9Y5F9 930 aa3.62□□□□□ -1.83
HMGB1P31-201ENST00000437242 EIF4G1Q04637 1599 aaKnown RBP3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 PLSCR5A0PG75 271 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 CXorf65A6NEN9 183 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 AREL1O15033 823 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 MSI1O43347 362 aaKnown RBP3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 SOCS5O75159 536 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 GLUD1P00367 558 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 FCGR1AP12314 374 aa3.61□□□□□ -1.83
HMGB1P31-201ENST00000437242 TCEA1P23193 301 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms