RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 MARCOQ9UEW3 520 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NRP1O14786 923 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ITM2AO43736 263 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KRT36O76013 467 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SERPINE1P05121 402 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 POLBP06746 335 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ACADSP16219 412 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 AOC1P19801 751 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GP5P40197 560 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RCN1Q15293 331 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RABGAP1LQ5R372 815 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TP53INP2Q8IXH6 220 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RBM15BQ8NDT2 890 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 OR6Y1Q8NGX8 325 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FBXO27Q8NI29 283 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PIWIL2Q8TC59 973 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ATP2A3Q93084 1043 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CERS2Q96G23 380 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 EBF4Q9BQW3 602 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PIH1D1Q9NWS0 290 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 STX18Q9P2W9 335 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ADAM28Q9UKQ2 775 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 F8W8V4 182 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 I6L893 689 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TREHO43280 583 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CREB3O43889 395 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FBXO21O94952 628 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KITP10721 976 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ALOX15P16050 662 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PTPN3P26045 913 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PSEN2P49810 448 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TKTL1P51854 596 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RPL10AP62906 217 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 IFRD2Q12894 506 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM72AQ5TYM5 149 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM72DQ6L9T8 149 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM72BQ86X60 149 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SIX6OS1Q8N1H7 587 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CCNYQ8ND76 341 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PGBD4Q96DM1 585 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZNF333Q96JL9 665 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CPNE1Q99829 537 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 C1orf21Q9H246 121 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ANLNQ9NQW6 1124 aa16.49■□□□□ 0.23
HLA-DQB2-231ENST00000435145 AP2A1O95782 977 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ERCC2P18074 760 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GRK2P25098 689 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 VHLP40337 213 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CPA2P48052 419 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SLC1A6P48664 564 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DAOAP59103 153 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPIDQ08752 370 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GRTP1Q5TC63 336 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KCTD11Q693B1 232 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RASSF3Q86WH2 238 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 WDR75Q8IWA0 830 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NME8Q8N427 588 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NRG4Q8WWG1 115 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PGAP3Q96FM1 320 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FCRL3Q96P31 734 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SORT1Q99523 831 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CASS4Q9NQ75 786 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CRTAC1Q9NQ79 661 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SEPT10Q9P0V9 454 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZFATQ9P243 1243 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DNAJC16Q9Y2G8 782 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PRR5-ARHGAP8B1AHC4 643 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SPECC1L-ADORA2AF8WAN1 911 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 LYPLA1O75608 230 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TM7SF2O76062 418 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM200BP0CF97 657 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ERVK-10P10266 1014 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 HOXC8P31273 242 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MLH1P40692 756 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 HARS2P49590 506 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 IRX4P78413 519 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ARHGAP8P85298 464 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SLC34A1Q06495 639 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NME3Q13232 169 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DNAL1Q4LDG9 190 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MDH1BQ5I0G3 518 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 OLFML2BQ68BL8 750 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ATG14Q6ZNE5 492 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PID1Q7Z2X4 250 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TLK2Q86UE8 772 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPP1R14CQ8TAE6 165 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DNAJC9Q8WXX5 260 aa16.48■□□□□ 0.23
HLA-DQB2-231ENST00000435145 BRD8Q9H0E9 1235 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms