RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TBC1D1Q86TI0 1168 aaPredicted RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 ZNF366Q8N895 744 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 TNIP2Q8NFZ5 429 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 NCSTNQ92542 709 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 INTS2Q9H0H0 1204 aaKnown RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 ARL8BQ9NVJ2 186 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 THAP1Q9NVV9 213 aa6.55□□□□□ -1.36
USP54-206ENST00000433394 ORC3Q9UBD5 711 aaPredicted RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 SIRT4Q9Y6E7 314 aaPredicted RBP6.55□□□□□ -1.36
USP54-206ENST00000433394 SH2D7A6NKC9 451 aaPredicted RBP6.54□□□□□ -1.36
USP54-206ENST00000433394 BTBD19C9JJ37 291 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 CLIC1O00299 241 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 USP12O75317 370 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 TMEM63AO94886 807 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 ACP5P13686 325 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 FPR3P25089 353 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 AGTR2P50052 363 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 SOX10P56693 466 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 NAA25Q14CX7 972 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 FAM69AQ5T7M9 428 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 SLC9C2Q5TAH2 1124 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 ITPRIPL1Q6GPH6 555 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 Q6YL49 198 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 LAS2Q8IYD9 372 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 TDRD7Q8NHU6 1098 aaKnown RBP6.54□□□□□ -1.36
USP54-206ENST00000433394 RFWD2Q8NHY2 731 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 CLEC4CQ8WTT0 213 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 MASTLQ96GX5 879 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 PLEKHA5Q9HAU0 1116 aa6.54□□□□□ -1.36
USP54-206ENST00000433394 A0A1W2PPH5 198 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 TNPO2O14787 897 aaKnown RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 HBP1O60381 514 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 LDHCP07864 332 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 PEPDP12955 493 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 DRD4P21917 467 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ABCD3P28288 659 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 NDUFS1P28331 727 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 PCSK6P29122 969 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 MPLP40238 635 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 SLC37A1P57057 533 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ARF3P61204 181 aaPredicted RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 ARF1P84077 181 aaKnown RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 HOXA4Q00056 320 aaPredicted RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 PRKG2Q13237 762 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 KRT32Q14532 448 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 CERKLQ49MI3 558 aaPredicted RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 GXYLT1Q4G148 440 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 FBLN7Q53RD9 439 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ATF7IPQ6VMQ6 1270 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 KYAT3Q6YP21 454 aaKnown RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 R3HCC1LQ7Z5L2 792 aaKnown RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 UEVLDQ8IX04 471 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ADAMTS15Q8TE58 950 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ADAMTS18Q8TE60 1221 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 KIF1BPQ96EK5 621 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 FUZQ9BT04 418 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 THAP7Q9BT49 309 aaPredicted RBP6.53□□□□□ -1.36
USP54-206ENST00000433394 AGXT2Q9BYV1 514 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 ASNSD1Q9NWL6 643 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 KLQ9UEF7 1012 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 OSGIN2Q9Y236 505 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 RCE1Q9Y256 329 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 RABGAP1Q9Y3P9 1069 aa6.53□□□□□ -1.36
USP54-206ENST00000433394 GOLGA6L10A0A0M3HER8 536 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 TMEM232C9JQI7 657 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 C1QTNF3-AMACRE9PGA6 284 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 SPTLC2O15270 562 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 DHX16O60231 1041 aaKnown RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 RNF8O76064 485 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 JTBO76095 146 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 ZNF202O95125 648 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 ENO1P06733 434 aaKnown RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 IGFBP2P18065 325 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 HOXD12P35452 270 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 CCR9P51686 369 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 CDH15P55291 814 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 ARHGAP8P85298 464 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 RNASE12Q5GAN4 147 aaKnown RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 AKNAD1Q5T1N1 836 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 TSTD2Q5T7W7 516 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 HAUS3Q68CZ6 603 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 RRM2BQ7LG56 351 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 PRRT2Q7Z6L0 340 aaPredicted RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 CPLX4Q7Z7G2 160 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 NFKBIDQ8NI38 313 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 CAGE1Q8TC20 777 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 CENPIQ92674 756 aaPredicted RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 CUL5Q93034 780 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 ZNF764Q96H86 408 aaPredicted RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 NPLQ9BXD5 320 aaPredicted RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 NUAK2Q9H093 628 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 MROH8Q9H579 483 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 BLOC1S4Q9NUP1 217 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms