RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 FOXD2O60548 495 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 HSF2BPO75031 334 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 DAB1O75553 588 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 GFPT2O94808 682 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 LUC7L3O95232 432 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 GLI1P08151 1106 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 DLDP09622 509 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 C7P10643 843 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 ZNF18P17022 549 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 MAOBP27338 520 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 GABRB2P47870 512 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 TPMTP51580 245 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 JAM2P57087 298 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 POLR2FP61218 127 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 CDK17Q00537 523 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 CENPCQ03188 943 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 BYSLQ13895 437 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 STARD3Q14849 445 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 FNDC3BQ53EP0 1204 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 RAB6CQ53S08 254 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 TRIM61Q5EBN2 209 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 PPM1JQ5JR12 505 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 SYT12Q8IV01 421 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 TOE1Q96GM8 510 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 HSPA12BQ96MM6 686 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 NPY6RQ99463 290 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 RAB6CQ9H0N0 254 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 FAM207AQ9NSI2 230 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 PIGVQ9NUD9 493 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■□□□□ 11
SMPD4-204ENST00000430682 LIMA1Q9UHB6 759 aaKnown RBP12.95□□□□□ -0.34
SMPD4-204ENST00000430682 SLCO1B1Q9Y6L6 691 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 ZZEF1O43149 2961 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 GIPC1O14908 333 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 KHNYNO15037 678 aaKnown RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 AP5Z1O43299 807 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 ZNF217O75362 1048 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 ADCY5O95622 1261 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 APOEP02649 317 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 NOS2P35228 1153 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 FLT3P36888 993 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 BPIFB4P59827 614 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 RPS14P62263 151 aaKnown RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 NOMO3P69849 1222 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 FMO1Q01740 532 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 NME3Q13232 169 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SYCP1Q15431 976 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 STX1AQ16623 288 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SLC23A3Q6PIS1 610 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SASS6Q6UVJ0 657 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SLC36A4Q6YBV0 504 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 CPA5Q8WXQ8 436 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 NT5C3BQ969T7 300 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SIPA1Q96FS4 1042 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 TBCBQ99426 244 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 GPR174Q9BXC1 333 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 CAPN10Q9HC96 672 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 ANO10Q9NW15 660 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 EVLQ9UI08 416 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 SLCO3A1Q9UIG8 710 aa12.94□□□□□ -0.34
SMPD4-204ENST00000430682 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-204ENST00000430682 TTC34A8MYJ7 566 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 M0QYT0 321 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 SYNCRIPO60506 623 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 PAGE1O75459 146 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 GJB6O95452 261 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 IGLV3-19P01714 112 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ENGP17813 658 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 POLR2EP19388 210 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 CD6P30203 668 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ACSL1P33121 698 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 MATKP42679 507 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 CXCR3P49682 368 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 STK19P49842 368 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 MYL5Q02045 173 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 ARID5AQ03989 594 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 PLEKHG6Q3KR16 790 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 CCDC183Q5T5S1 534 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 NAA35Q5VZE5 725 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 CXorf57Q6NSI4 855 aaKnown RBP12.93□□□□□ -0.34
SMPD4-204ENST00000430682 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
SMPD4-204ENST00000430682 FAM124AQ86V42 546 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms