RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RAP1GAP2Q684P5 730 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 BEND5Q7L4P6 421 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 CIR1Q86X95 450 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 LGI2Q8N0V4 545 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 PRMT1Q99873 361 aaKnown RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 LHX5Q9H2C1 402 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 POPDC2Q9HBU9 364 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 APEX2Q9UBZ4 518 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 SERGEFQ9UGK8 458 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 SLCO3A1Q9UIG8 710 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 NFE2L3Q9Y4A8 694 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 PTPRBP23467 1997 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 DMXL2Q8TDJ6 3036 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 FAM170AA1A519 330 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 TTC34A8MYJ7 566 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 KCNU1A8MYU2 1149 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 SIN3BO75182 1162 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 GRAP2O75791 330 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 TACR2P21452 398 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 CSNK1EP49674 416 aaKnown RBP17.7■□□□□ 0.42
CPSF4-203ENST00000430038 IRAK1P51617 712 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 HSP90AA4PQ58FG1 418 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 KCNT1Q5JUK3 1230 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 MIIPQ5JXC2 388 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 C9orf64Q5T6V5 341 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 LAYNQ6UX15 382 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 RABEPKQ7Z6M1 372 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 DEFB106AQ8N104 65 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 HDDC3Q8N4P3 179 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 HJURPQ8NCD3 748 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-203ENST00000430038 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 GOLGA1Q92805 767 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 GATA6Q92908 595 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 FAM129BQ96TA1 746 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 IRX2Q9BZI1 471 aaPredicted RBP17.7■□□□□ 0.42
CPSF4-203ENST00000430038 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 EBF2Q9HAK2 575 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 PLCB1Q9NQ66 1216 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 KLK13Q9UKR3 277 aa17.7■□□□□ 0.42
CPSF4-203ENST00000430038 KCNK3O14649 394 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 BCAT2O15382 392 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 LUC7L3O95232 432 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 FGFR1OPO95684 399 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ERBB2P04626 1255 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ATP5BP06576 529 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 SYPP08247 313 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 KCNMA1Q12791 1236 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 PITRM1Q5JRX3 1037 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 OTUD1Q5VV17 481 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 FAM183BPQ6ZVS7 135 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ENOSF1Q7L5Y1 443 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 SLC47A2Q86VL8 602 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 BIRC7Q96CA5 298 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 RPL10LQ96L21 214 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 SLC2A13Q96QE2 648 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 RSPH9Q9H1X1 276 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 SLC32A1Q9H598 525 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ANLNQ9NQW6 1124 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 SUSD2Q9UGT4 822 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ERVW-1Q9UQF0 538 aa17.69■□□□□ 0.42
CPSF4-203ENST00000430038 FNDC3AQ9Y2H6 1198 aaKnown RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.69■□□□□ 0.42
CPSF4-203ENST00000430038 A0A1B0GVT2 93 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 C10orf142B7Z368 130 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 I6L893 689 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 CAPN9O14815 690 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 MED7O43513 233 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 CBFA2T3O75081 653 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 PROS1P07225 676 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 VAV1P15498 845 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 GNSP15586 552 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 TFE3P19532 575 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 MZF1P28698 734 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 STK19P49842 368 aaPredicted RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 HNRNPA1L2Q32P51 320 aaKnown RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 ARTNQ5T4W7 220 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 UNQ6494/PRO21346Q6UXR6 183 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 CHCHD4Q8N4Q1 142 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 C1orf131Q8NDD1 294 aaKnown RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 IGSF8Q969P0 613 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 PPP1R13BQ96KQ4 1090 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 CLSTN2Q9H4D0 955 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 SUN2Q9UH99 717 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 DNAJC12Q9UKB3 198 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
CPSF4-203ENST00000430038 PCDHGC3Q9UN70 934 aa17.68■□□□□ 0.42
CPSF4-203ENST00000430038 SYNJ2BP-COX16A0A087WUM0 186 aa17.67■□□□□ 0.42
CPSF4-203ENST00000430038 GTPBP10A4D1E9 387 aaKnown RBP17.67■□□□□ 0.42
CPSF4-203ENST00000430038 SART1O43290 800 aaKnown RBP17.67■□□□□ 0.42
CPSF4-203ENST00000430038 SEMA4FO95754 770 aa17.67■□□□□ 0.42
CPSF4-203ENST00000430038 IGHV4-34P06331 123 aa17.67■□□□□ 0.42
CPSF4-203ENST00000430038 GGCXP38435 758 aa17.67■□□□□ 0.42
CPSF4-203ENST00000430038 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
CPSF4-203ENST00000430038 METAP1P53582 386 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms