RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PDCLQ13371 301 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ACOX1Q15067 660 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 MEA1Q16626 185 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM187BQ17R55 369 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 TRIM71Q2Q1W2 868 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMEM119Q4V9L6 283 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 MAP3K21Q5TCX8 1036 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ITPRIPL1Q6GPH6 555 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 VSTM1Q6UX27 236 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 NEK10Q6ZWH5 1172 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 SYT13Q7L8C5 426 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 BCDIN3DQ7Z5W3 292 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CCDC117Q8IWD4 279 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 TCP11L2Q8N4U5 519 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 METTL25Q8N6Q8 603 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 LINC01465Q8N7H1 131 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 C12orf76Q8N812 135 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 C11orf44Q8N8P7 122 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 PNLDC1Q8NA58 520 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 SUN3Q8TAQ9 357 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 KCNG4Q8TDN1 519 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 RSRC1Q96IZ7 334 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 MACROD1Q9BQ69 325 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CINPQ9BW66 212 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ARHGAP39Q9C0H5 1083 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 USP44Q9H0E7 712 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ELAC1Q9H777 363 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CHODLQ9H9P2 273 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 G6PC2Q9NQR9 355 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 OLA1Q9NTK5 396 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 GAR1Q9NY12 217 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZNF70Q9UC06 446 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 HSF4Q9ULV5 492 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CA14Q9ULX7 337 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 DNAJC16Q9Y2G8 782 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 FSD2A1L4K1 749 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 WIPF3A6NGB9 483 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 KIF28PB7ZC32 967 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMEM232C9JQI7 657 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 E7EVH7 732 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 H3BNC9 293 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 K7ENM7 598 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TCERG1O14776 1098 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 DOK2O60496 412 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CBFA2T3O75081 653 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RNF8O76064 485 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RTN3O95197 1032 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 GLP2RO95838 553 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TUBB4AP04350 444 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CNPP09543 421 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 PEPDP12955 493 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 APEHP13798 732 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 YY1P25490 414 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ABCD3P28288 659 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 MCM5P33992 734 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RAD52P43351 418 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 AARSP49588 968 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 COPB1P53618 953 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM3BP58499 235 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 NUCB1Q02818 461 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CCDC15Q0P6D6 951 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 GALNT2Q10471 571 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 PRKG2Q13237 762 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ATP1A4Q13733 1029 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 PDE1CQ14123 709 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ERV3-1Q14264 604 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 LARS2Q15031 903 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TRIM60Q495X7 471 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 LRRC24Q50LG9 513 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 SPATA1Q5VX52 437 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 HAUS3Q68CZ6 603 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ACAD10Q6JQN1 1059 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RINT1Q6NUQ1 792 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMEM65Q6PI78 240 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 DSTYKQ6XUX3 929 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 C4orf50Q6ZRC1 276 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ANKS1BQ7Z6G8 1248 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 GALNT5Q7Z7M9 940 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CHD1LQ86WJ1 897 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TTC30AQ86WT1 665 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 CHSY1Q86X52 802 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RASGRP3Q8IV61 690 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 P3H2Q8IVL5 708 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 OR6Y1Q8NGX8 325 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TDRD7Q8NHU6 1098 aaKnown RBP3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 TBC1D22AQ8WUA7 517 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 DPF1Q92782 380 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 GOLGA1Q92805 767 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 C3orf49Q96BT1 292 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 GRAMD1AQ96CP6 724 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RITA1Q96K30 269 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 HS6ST2Q96MM7 605 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 WDR24Q96S15 920 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 REEP2Q9BRK0 252 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 NUDT22Q9BRQ3 303 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 HERC2P3Q9BVR0 1158 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 ABHD16BQ9H3Z7 469 aa3.3□□□□□ -1.88
HMGB1P9-201ENST00000429856 RMI1Q9H9A7 625 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms