RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 CCDC110Q8TBZ0 833 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 TRPC4APQ8TEL6 797 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 SLC35F5Q8WV83 523 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
NUP98-207ENST00000429801 DNAJC9Q8WXX5 260 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 MYLPFQ96A32 169 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 C18orf8Q96DM3 657 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 SMARCD1Q96GM5 515 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 PKMYT1Q99640 499 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 CHST7Q9NS84 486 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 PARVAQ9NVD7 372 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 PDP2Q9P2J9 529 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 CYTH4Q9UIA0 394 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 RWDD3Q9Y3V2 267 aa8.99□□□□□ -0.97
NUP98-207ENST00000429801 GPC6Q9Y625 555 aaPredicted RBP8.99□□□□□ -0.97
NUP98-207ENST00000429801 A8MX80 341 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 FAM47E-STBD1D6RA91 191 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 XPO1O14980 1071 aaKnown RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 BUB1O43683 1085 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 MOCS3O95396 460 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 GSTA1P08263 222 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 GABRB2P47870 512 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 MRPS25P82663 173 aaKnown RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 AMPD2Q01433 879 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 COX10Q12887 443 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 PTP4A2Q12974 167 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 RCN2Q14257 317 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 PTPN20Q4JDL3 420 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 SLC39A12Q504Y0 691 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 PAQR9Q6ZVX9 377 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 TAS1R1Q7RTX1 841 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 FAM35AQ86V20 835 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 ARHGEF26Q96DR7 871 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 B3GALT6Q96L58 329 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 HSFY1Q96LI6 401 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 PHF12Q96QT6 1004 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 TMEM209Q96SK2 561 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 CPXM1Q96SM3 734 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 UQCC2Q9BRT2 126 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 HERC2P3Q9BVR0 1158 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 KRT82Q9NSB4 513 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 TTC7AQ9ULT0 858 aaPredicted RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 CLDN5O00501 218 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 ATMINO43313 823 aaPredicted RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 TJP3O95049 919 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 CDK4P11802 303 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 GLUD2P49448 558 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 HADHBP55084 474 aaKnown RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 HLTFQ14527 1009 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP98-207ENST00000429801 C2CD6Q53TS8 623 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 IGSF11Q5DX21 431 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 PMF1Q6P1K2 205 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 CLEC20AQ6ZU45 233 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 LRRTM3Q86VH5 581 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 RIBC1Q8N443 379 aaPredicted RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 NATD1Q8N6N6 113 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 OSCP1Q8WVF1 389 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 ZFPM2Q8WW38 1151 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 FUBP3Q96I24 572 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP98-207ENST00000429801 NAPGQ99747 312 aaPredicted RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 SEMA4AQ9H3S1 761 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 CCDC177Q9NQR7 707 aaPredicted RBP8.98□□□□□ -0.97
NUP98-207ENST00000429801 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
NUP98-207ENST00000429801 SRRM3A6NNA2 597 aaPredicted RBP8.97□□□□□ -0.97
NUP98-207ENST00000429801 TBC1D4O60343 1298 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 SNX2O60749 519 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 FGF18O76093 207 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 URODP06132 367 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 CPB1P15086 417 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 VAV1P15498 845 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 MLLT3P42568 568 aaPredicted RBP8.97□□□□□ -0.97
NUP98-207ENST00000429801 MSH2P43246 934 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 DSG1Q02413 1049 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 TAP1Q03518 808 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 GPR17Q13304 367 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 SHHQ15465 462 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 PSMD5Q16401 504 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 CCDC142Q17RM4 750 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 CFAP221Q4G0U5 840 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 C9orf50Q5SZB4 431 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 PLEKHA7Q6IQ23 1121 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 DNAJC24Q6P3W2 148 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 PRR23CQ6ZRP0 262 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 ZDHHC17Q8IUH5 632 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 GPR65Q8IYL9 337 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 SYCE1Q8N0S2 351 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 ZNF564Q8TBZ8 553 aaPredicted RBP8.97□□□□□ -0.97
NUP98-207ENST00000429801 C2orf15Q8WU43 125 aaKnown RBP8.97□□□□□ -0.97
NUP98-207ENST00000429801 NMD3Q96D46 503 aaKnown RBP8.97□□□□□ -0.97
NUP98-207ENST00000429801 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 TMLHEQ9NVH6 421 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 TBCCD1Q9NVR7 557 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 MTRRQ9UBK8 725 aa8.97□□□□□ -0.97
NUP98-207ENST00000429801 PCDHB5Q9Y5E4 795 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms