RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	TJP2	Q9UDY2	1190 aa		18.4	■□□□□ 0.54
MRPL28-203	ENST00000429738	PCDHGC3	Q9UN70	934 aa		18.4	■□□□□ 0.54
MRPL28-203	ENST00000429738	ASXL3	Q9C0F0	2248 aa		18.39	■□□□□ 0.54
MRPL28-203	ENST00000429738	PLXNB3	Q9ULL4	1909 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	KCNJ18	B7U540	433 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	EPHX1	P07099	455 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	CD70	P32970	193 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	MIIP	Q5JXC2	388 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	C19orf48	Q6RUI8	117 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	NAXD	Q8IW45	347 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	PNPLA1	Q8N8W4	532 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	ZNF557	Q8N988	423 aa	Predicted RBP	18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	OR2T3	Q8NH03	318 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	FIBIN	Q8TAL6	211 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	ADAM32	Q8TC27	787 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	CYB5D2	Q8WUJ1	264 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	SIPA1	Q96FS4	1042 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	DDX50	Q9BQ39	737 aa	Known RBP	18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	NUCKS1	Q9H1E3	243 aa	Known RBP	18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	LHX5	Q9H2C1	402 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	CABIN1	Q9Y6J0	2220 aa		18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	URB1	O60287	2271 aa	Known RBP	18.39	■□□□□ 0.53
MRPL28-203	ENST00000429738	CAPN9	O14815	690 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	DLD	P09622	509 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	HLA-E	P13747	358 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	MAOB	P27338	520 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	USP8	P40818	1118 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	TPMT	P51580	245 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	YWHAZ	P63104	245 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	ARID5A	Q03989	594 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	TPD52L1	Q16890	204 aa	Predicted RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	MS4A13	Q5J8X5	152 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	MBLAC2	Q68D91	279 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	FAM114A1	Q8IWE2	563 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	HJURP	Q8NCD3	748 aa	Predicted RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	DNASE2B	Q8WZ79	361 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	PRCC	Q92733	491 aa	Predicted RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	TOE1	Q96GM8	510 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	CPXM1	Q96SM3	734 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	NUP62CL	Q9H1M0	184 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	NDST4	Q9H3R1	872 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	CCDC86	Q9H6F5	360 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	ASNSD1	Q9NWL6	643 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	XPO7	Q9UIA9	1087 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	PLA2G4C	Q9UP65	541 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	APOBEC2	Q9Y235	224 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	NFE2L3	Q9Y4A8	694 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	NUMA1	Q14980	2115 aa		18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	GOLGA4	Q13439	2230 aa	Known RBP	18.38	■□□□□ 0.53
MRPL28-203	ENST00000429738	TRUB2	O95900	331 aa	Known RBP	18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	GLI1	P08151	1106 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	CLCN1	P35523	988 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	RPS24	P62847	133 aa	Known RBP	18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	PITX1	P78337	314 aa	Predicted RBP	18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	PTK2	Q05397	1052 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	GRIK2	Q13002	908 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	TAF5	Q15542	800 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	VWA3B	Q502W6	1294 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	GLRX5	Q86SX6	157 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	MFN1	Q8IWA4	741 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	TTC17	Q96AE7	1141 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	MYO19	Q96H55	970 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	SLC2A13	Q96QE2	648 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	TUBGCP2	Q9BSJ2	902 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	DACH1	Q9UI36	760 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	DNAJC12	Q9UKB3	198 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	INTS6	Q9UL03	887 aa	Known RBP	18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738	IGSF10	Q6WRI0	2623 aa		18.37	■□□□□ 0.53
MRPL28-203	ENST00000429738		A0A1B0GTW7	788 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	TYW5	A2RUC4	315 aa	Known RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	FOXN3	O00409	490 aa	Predicted RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	CBFA2T3	O75081	653 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	ATP5B	P06576	529 aa	Known RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	OXTR	P30559	389 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	KCNMA1	Q12791	1236 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	FNDC3B	Q53EP0	1204 aa	Known RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	SOWAHC	Q53LP3	525 aa	Predicted RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	DCAF6	Q58WW2	860 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	SLCO6A1	Q86UG4	719 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	PDZD3	Q86UT5	571 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	FAM71A	Q8IYT1	594 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	ZNF366	Q8N895	744 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	CADM4	Q8NFZ8	388 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	PPP1R13B	Q96KQ4	1090 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	BTN2A3P	Q96KV6	586 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	FBRS	Q9HAH7	460 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	LMBRD1	Q9NUN5	540 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	KIAA1522	Q9P206	1035 aa	Predicted RBP	18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	STIM2	Q9P246	746 aa		18.36	■□□□□ 0.53
MRPL28-203	ENST00000429738	MOCS2	O96007	188 aa	Predicted RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	APOE	P02649	317 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PNMA6A	P0CW24	399 aa	Predicted RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PRKCSH	P14314	528 aa	Predicted RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	POLR2E	P19388	210 aa	Known RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	FSCB	Q5H9T9	825 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	SLC47A2	Q86VL8	602 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PASD1	Q8IV76	773 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	C1orf131	Q8NDD1	294 aa	Known RBP	18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms