RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TIMM44O43615 452 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 BUD23O43709 281 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 OR56A5P0C7T3 313 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 AMD1P17707 334 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 PTPN3P26045 913 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 SOX11P35716 441 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 GPR1P46091 355 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 OR6K2Q8NGY2 324 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 PCNAP12004 261 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 ALDH18A1P54886 795 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 MPP3Q13368 585 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 GRAMD4Q6IC98 578 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 FAM228AQ86W67 206 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 ZNF784Q8NCA9 323 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 FCRL2Q96LA5 508 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 SYTL2Q9HCH5 934 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 ZFP14Q9HCL3 533 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 EVA1BQ9NVM1 165 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 GPSM3Q9Y4H4 160 aa17.48■□□□□ 0.39
SMARCA4-203ENST00000429416 NRP1O14786 923 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 DYRK3O43781 588 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 CD86P42081 329 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 C21orf59P57076 290 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 SLC29A2Q14542 456 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 SNX27Q96L92 541 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 SNRNP25Q9BV90 132 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 FGFBP2Q9BYJ0 223 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 C10orf88Q9H8K7 445 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 WDR41Q9HAD4 459 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 DUS2Q9NX74 493 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 CLK2P49760 499 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 CSHL1Q14406 222 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 LDLRAD1Q5T700 205 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 CES3Q6UWW8 571 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 LRRC37BQ96QE4 947 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 PRPF18Q99633 342 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 TBL1YQ9BQ87 522 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 RIC8BQ9NVN3 520 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 DNAJC16Q9Y2G8 782 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 VAPBO95292 243 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 STAU1O95793 577 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 APOA4P06727 396 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 MAMLD1Q13495 774 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 ARL14EPQ8N8R7 260 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 OTUB1Q96FW1 271 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 CCDC138Q96M89 665 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 TEX12Q9BXU0 123 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 HTR1BP28222 390 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 RBL1P28749 1068 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 NDRG1Q92597 394 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 MLPHQ9BV36 600 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 NMRK1Q9NWW6 199 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 SEC13P55735 322 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 FAM71AQ8IYT1 594 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 VPS37AQ8NEZ2 397 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 MTMR8Q96EF0 704 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 WWP1Q9H0M0 922 aa17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 SAE1Q9UBE0 346 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-203ENST00000429416 PTPRJQ12913 1337 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 PSMD12O00232 456 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ZSCAN9O15535 394 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 AGTP01019 485 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 EPHX1P07099 455 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 PYGMP11217 842 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 MATKP42679 507 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ABCE1P61221 599 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 CNPY4Q8N129 248 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 KIAA1522Q9P206 1035 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ZNHIT2Q9UHR6 403 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ZNF536O15090 1300 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 GOLGA8TH3BQL2 631 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 SHC3Q92529 594 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 GPC1P35052 558 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ABL2P42684 1182 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 BMT2Q1RMZ1 405 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 OXCT2Q9BYC2 517 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 APPL1Q9UKG1 709 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 KDELR1P24390 212 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 EEF1B2P24534 225 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 MGAT1P26572 445 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 GJA9P57773 515 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 LRRC8EQ6NSJ5 796 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ZNF438Q7Z4V0 828 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 HES6Q96HZ4 224 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 ABCG4Q9H172 646 aa17.46■□□□□ 0.39
SMARCA4-203ENST00000429416 A0A1B0GUA9 196 aa17.45■□□□□ 0.38
SMARCA4-203ENST00000429416 CSF2RAP15509 400 aa17.45■□□□□ 0.38
SMARCA4-203ENST00000429416 CYP3A5P20815 502 aa17.45■□□□□ 0.38
SMARCA4-203ENST00000429416 CDC16Q13042 620 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms