RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 MGRN1O60291 552 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ITGB6P18564 788 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 RRM1P23921 792 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 PIK3R1P27986 724 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 MLH1P40692 756 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 PIK3CGP48736 1102 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 OAZ1P54368 228 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ERVK-24P63145 666 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 NTRK3Q16288 839 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 MIIPQ5JXC2 388 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 PRR23CQ6ZRP0 262 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 USP45Q70EL2 814 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 CYP4X1Q8N118 509 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 SIX5Q8N196 739 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 TMEM199Q8N511 208 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 SMARCD1Q96GM5 515 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF304Q9HCX3 659 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 NEUROD4Q9HD90 331 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 IL1RAPL1Q9NZN1 696 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ZMYM2Q9UBW7 1377 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ERI2A8K979 691 aaKnown RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 LSM8O95777 96 aaKnown RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 AXLP30530 894 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 SKIV2L2P42285 1042 aaKnown RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 RAP1GAPP47736 663 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 FXR1P51114 621 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 GRIK4Q16099 956 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 ADRM1Q16186 407 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 PTGISQ16647 500 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 PABPC1LQ4VXU2 614 aaKnown RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 GJB7Q6PEY0 223 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 KIAA1324Q6UXG2 1013 aaKnown RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 LRRC74BQ6ZQY2 392 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 OR8H2Q8N162 312 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 CACTIN-AS1Q8N1I8 211 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 OSMRQ99650 979 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 CNPPD1Q9BV87 410 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 MIR1-1HGQ9H1L0 117 aa9.13□□□□□ -0.95
CTNND1-208ENST00000428599 RBM22Q9NW64 420 aaKnown RBP eCLIP9.13□□□□□ -0.953e-6■■■■□ 26.3
CTNND1-208ENST00000428599 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-208ENST00000428599 RAD51CO43502 376 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ZBTB14O43829 449 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MAPKAPK2P49137 400 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 GIT2Q14161 759 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 RCN1Q15293 331 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TERF2Q15554 542 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TSNQ15631 228 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CCNG2Q16589 344 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 INSCQ1MX18 579 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 OLFML2BQ68BL8 750 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PMF1Q6P1K2 205 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 C15orf52Q6ZUT6 534 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 R3HCC1LQ7Z5L2 792 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 C4orf19Q8IY42 314 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 RNF208Q9H0X6 261 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 RHBGQ9H310 441 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SNX13Q9Y5W8 968 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 DSG1Q02413 1049 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MFSD10Q14728 455 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TRIQKQ629K1 86 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TAF2Q6P1X5 1199 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FAM131BQ86XD5 332 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SLC13A5Q86YT5 568 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PROX1Q92786 737 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FDXACB1Q9BRP7 624 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ROGDIQ9GZN7 287 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PIGUQ9H490 435 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MRPL17Q9NRX2 175 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 GPATCH2LQ9NWQ4 482 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 PCDHAC2Q9Y5I4 1007 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MORC2Q9Y6X9 1032 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 GAKO14976 1311 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 LINC00854A0A1B0GVQ3 168 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 FAM20BO75063 409 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 BAIAP3O94812 1187 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TGFB3P10600 412 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MYL12AP19105 171 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CPA2P48052 419 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 NUMBP49757 651 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MPP3Q13368 585 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 RSBN1Q5VWQ0 802 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 KRT74Q7RTS7 529 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 GLT6D1Q7Z4J2 308 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ZSWIM1Q9BR11 485 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SMPD4Q9NXE4 827 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MCM8Q9UJA3 840 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 VANGL2Q9ULK5 521 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 TSC22D4Q9Y3Q8 395 aa9.12□□□□□ -0.95
CTNND1-208ENST00000428599 MED1Q15648 1581 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-208ENST00000428599 ANKDD1BA6NHY2 528 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms