RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 FAM72DQ6L9T8 149 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TIGD7Q6NT04 549 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 ZDHHC24Q6UX98 284 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 CROCCP2Q86T23 111 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TMEM150AQ86TG1 271 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 FAM72BQ86X60 149 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 FAM217AQ8IXS0 508 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 PPIL6Q8IXY8 311 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 NACA2Q9H009 215 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 KLC2Q9H0B6 622 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 HAUS2Q9NVX0 235 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TRHDEQ9UKU6 1024 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
NR1I3-209ENST00000428574 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 HS3ST4Q9Y661 456 aa9.34□□□□□ -0.91
NR1I3-209ENST00000428574 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ERI2A8K979 691 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 HIDE1A8MVS5 230 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 F5H5T6 163 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ZNF197O14709 1029 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 GRM6O15303 877 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CHADO15335 359 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 TP73O15350 636 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ACSL4O60488 711 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CLASP2O75122 1294 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 STC2O76061 302 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 TSHRP16473 764 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 PTPN2P17706 415 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CCNCP24863 283 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ETFBP38117 255 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CDR1P51861 262 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 NUBP1P53384 320 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 EIF3BP55884 814 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 TNK2Q07912 1038 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 SLC10A2Q12908 348 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 AUHQ13825 339 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CAMK1Q14012 370 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CASP8Q14790 479 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 PARP15Q460N3 678 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ARHGAP15Q53QZ3 475 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 MPP7Q5T2T1 576 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ADGRF1Q5T601 910 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 RNASEH2BQ5TBB1 312 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 IZUMO3Q5VZ72 239 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 LRIG3Q6UXM1 1119 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ZNF783Q6ZMS7 281 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 CHST9Q7L1S5 443 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 MIB1Q86YT6 1006 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ZNF557Q8N988 423 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 HTR3CQ8WXA8 447 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 EXOC4Q96A65 974 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 SPATA13Q96N96 652 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 TXLNGYQ9BZA5 131 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 DPH5Q9H2P9 285 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ETNK2Q9NVF9 386 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ZNF446Q9NWS9 450 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 SAE1Q9UBE0 346 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ANAPC5Q9UJX4 755 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 LSM7Q9UK45 103 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 SNX24Q9Y343 169 aa9.33□□□□□ -0.92
NR1I3-209ENST00000428574 ZNF638Q14966 1978 aaKnown RBP9.33□□□□□ -0.92
NR1I3-209ENST00000428574 TRAV19A0A0A6YYK7 116 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 A0A1B0GVM2 712 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 TCAF2A6NFQ2 919 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 CCDC85CA6NKD9 419 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 AP3B1O00203 1094 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 GFRA2O00451 464 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 KCNN4O15554 427 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 CLDN11O75508 207 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 TBX18O95935 607 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 IFNB1P01574 187 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 SRGAP2BP0DMP2 458 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 TPSB2P20231 275 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 TACR2P21452 398 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 GABRR2P28476 465 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 RBL1P28749 1068 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 CA8P35219 290 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 RPL22P35268 128 aaKnown RBP9.32□□□□□ -0.92
NR1I3-209ENST00000428574 IFNAR2P48551 515 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 ITGA8P53708 1063 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 PLTPP55058 493 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 CDH4P55283 916 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 OXCT1P55809 520 aa9.32□□□□□ -0.92
NR1I3-209ENST00000428574 IFI35P80217 286 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-209ENST00000428574 GPS1Q13098 491 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms