RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 POLNQ7Z5Q5 900 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 DAW1Q8N136 415 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 TMCO5AQ8N6Q1 288 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ZSWIM2Q8NEG5 633 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 WDR12Q9GZL7 423 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 RMND5AQ9H871 391 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 GPN2Q9H9Y4 310 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 SMYD2Q9NRG4 433 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 SERPINB13Q9UIV8 391 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 TRAF6Q9Y4K3 522 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 KAT6AQ92794 2004 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 CLDN25C9JDP6 229 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 CSH1P0DML2 217 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 CSH2P0DML3 217 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 CHRNB1P11230 501 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 SLC16A2P36021 539 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 SCNN1DP51172 638 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 NME5P56597 212 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 IFITM2Q01629 132 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 RHDQ02161 417 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 AOC3Q16853 763 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 N4BP2L1Q5TBK1 243 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-206ENST00000428313 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 TTC30BQ8N4P2 665 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 LSM14AQ8ND56 463 aaKnown RBP16.46■□□□□ 0.23
C9orf3-206ENST00000428313 PDZD8Q8NEN9 1154 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 RMDN3Q96TC7 470 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 NAA50Q9GZZ1 169 aaKnown RBP16.46■□□□□ 0.23
C9orf3-206ENST00000428313 COG4Q9H9E3 785 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 POLR1BQ9H9Y6 1135 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 SUCOQ9UBS9 1254 aaKnown RBP16.46■□□□□ 0.23
C9orf3-206ENST00000428313 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
C9orf3-206ENST00000428313 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
C9orf3-206ENST00000428313 FAM159BA6NKW6 160 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ZBTB39O15060 712 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 SLC22A1O15245 554 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 MSI1O43347 362 aaKnown RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TADA2AO75478 443 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 CYP3A4P08684 503 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 KCNA4P22459 653 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 HPCAL1P37235 193 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 MTX3Q5HYI7 312 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ATG14Q6ZNE5 492 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TAB3Q8N5C8 712 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 PNPT1Q8TCS8 783 aaKnown RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TBC1D22BQ9NU19 505 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 FER1L6Q2WGJ9 1857 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TGM1P22735 817 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 SERPINB5P36952 375 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 PSMD8P48556 350 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 KRT76Q01546 638 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 PIGHQ14442 188 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TAZQ16635 292 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 MROH9Q5TGP6 573 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ZBTB49Q6ZSB9 765 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 ANKRD13BQ86YJ7 626 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 LRRC49Q8IUZ0 686 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 OR13F1Q8NGS4 319 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 USP13Q92995 863 aaPredicted RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 RCN3Q96D15 328 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 LRRC39Q96DD0 335 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 HERC2P3Q9BVR0 1158 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 YTHDF1Q9BYJ9 559 aaKnown RBP16.45■□□□□ 0.22
C9orf3-206ENST00000428313 HMG20AQ9NP66 347 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 TCF7L2Q9NQB0 619 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 JAG2Q9Y219 1238 aa16.45■□□□□ 0.22
C9orf3-206ENST00000428313 CLOCKO15516 846 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 CFLARO15519 480 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 CST8O60676 142 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 CPNE6O95741 557 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 RALBP11234 206 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 VDRP11473 427 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 SLC7A1P30825 629 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ARRB2P32121 409 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 DPP6P42658 865 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 RPL7AP62424 266 aaKnown RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 PRAMEP78395 509 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 ADAM17P78536 824 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 SLC10A2Q12908 348 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-206ENST00000428313 NME3Q13232 169 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 SLC9B1Q4ZJI4 515 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 PPM1LQ5SGD2 360 aa16.44■□□□□ 0.22
C9orf3-206ENST00000428313 TXNRD3NBQ6F5E7 133 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms