RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 COPG2Q9UBF2 871 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 IP6K2Q9UHH9 426 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 HDAC3O15379 428 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TLR3O15455 904 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 IL1R1P14778 569 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 NSFP46459 744 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 GABRB2P47870 512 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CCR3P51677 355 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 PCLAFQ15004 111 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ANKRD26P1Q6NSI1 321 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 EPGNQ6UW88 154 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 FBXO36Q8NEA4 188 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 BHMTQ93088 406 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 XPNPEP1Q9NQW7 623 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TMOD2Q9NZR1 351 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 UGT2A1Q9Y4X1 527 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 AQP9O43315 295 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 IDUAP35475 653 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SERPINB9P50453 376 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 NEK2P51955 445 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TMBIM6P55061 237 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MRPS22P82650 360 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 MTMR2Q13614 643 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ITGA7Q13683 1181 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MAP7D1Q3KQU3 841 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 PRR16Q569H4 304 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 DARS2Q6PI48 645 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 USP51Q70EK9 711 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CADM3Q8N126 398 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TMEM161BQ8NDZ6 487 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MAELQ96JY0 434 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 RILPQ96NA2 401 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 VRTNQ9H8Y1 702 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 NAALAD2Q9Y3Q0 740 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ZGRF1Q86YA3 2104 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 hCG_2014768A0A024R1R8 64 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SFI1A8K8P3 1242 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 C9IYK1 514 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 H3BMQ9 156 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SNAP91O60641 907 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 IL18RAPO95256 599 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ATG7O95352 703 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 JUNP05412 331 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 CEACAM7Q14002 265 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 UBAP2LQ14157 1087 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 FRG1Q14331 258 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 ATP13A4Q4VNC1 1196 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ZNF394Q53GI3 561 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 HP1BP3Q5SSJ5 553 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 LLGL2Q6P1M3 1020 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 C8orf82Q6P1X6 216 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 CYP4V2Q6ZWL3 525 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 COG8Q96MW5 612 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SLC29A1Q99808 456 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TPK1Q9H3S4 243 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 DNAJC28Q9NX36 388 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 HSPBP1Q9NZL4 362 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 IKBKGQ9Y6K9 419 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TCRBV7S3A2A0A539 114 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TARM1B6A8C7 271 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ZBTB39O15060 712 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CLOCKO15516 846 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CLPXO76031 633 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SEC14L2O76054 403 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CHRNEQ04844 493 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TRAP1Q12931 704 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 SELENBP1Q13228 472 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 C4orf22Q6V702 233 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 NIPA1Q7RTP0 329 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MINDY2Q8NBR6 621 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TNIP2Q8NFZ5 429 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 SPATA18Q8TC71 538 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 RAB2BQ8WUD1 216 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 POMGNT1Q8WZA1 660 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MRIQ9BWK5 157 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 VPS37BQ9H9H4 285 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 MAGEE1Q9HCI5 957 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CRNNQ9UBG3 495 aaPredicted RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 CCPG1Q9ULG6 757 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CNTNAP2Q9UHC6 1331 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 PRORSD1PA6NEY8 169 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TOP3BO95985 862 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 ASS1P00966 412 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 NTRK1P04629 796 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 DPP6P42658 865 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 IDH3AP50213 366 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 EPHB1P54762 984 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ARPC4P59998 168 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CD300CQ08708 224 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ABCB5Q2M3G0 1257 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 CRY2Q49AN0 593 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 FSCBQ5H9T9 825 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 TRMT10BQ6PF06 316 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 MAP4K3Q8IVH8 894 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 ANKRD13AQ8IZ07 590 aa5.27□□□□□ -1.57
RIF1-203ENST00000428287 RP9Q8TA86 221 aaKnown RBP5.27□□□□□ -1.57
RIF1-203ENST00000428287 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms