RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TTC7BQ86TV6 843 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 TDRD5Q8NAT2 981 aaKnown RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 PHF21AQ96BD5 680 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SLC28A3Q9HAS3 691 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 DCDC2Q9UHG0 476 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ACOT9Q9Y305 439 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CASZ1Q86V15 1759 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 RPLP2P05387 115 aaKnown RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 AQP5P55064 265 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 PSMD5Q16401 504 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ARMC12Q5T9G4 340 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 DEPDC1Q5TB30 811 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CYP4X1Q8N118 509 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CNBD2Q96M20 576 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SEMA4AQ9H3S1 761 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 HAO1Q9UJM8 370 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 BTN3A1O00481 513 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 EIF3HO15372 352 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX13-203ENST00000428135 FOXP2O15409 715 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 TIMM44O43615 452 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 MSCO60682 206 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 BANF1O75531 89 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 KLHL2O95198 593 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 TYMPP19971 482 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 PSMB4P28070 264 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 GABRR2P28476 465 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 NFYCQ13952 458 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SETD3Q86TU7 594 aaPredicted RBP9.94□□□□□ -0.82
SNX13-203ENST00000428135 IFNL1Q8IU54 200 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 MMGT1Q8N4V1 131 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 DCLK3Q9C098 648 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ABCC13Q9NSE7 274 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 SOHLH2Q9NX45 425 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 MPP6Q9NZW5 540 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 CACNG4Q9UBN1 327 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 ZNF112Q9UJU3 913 aa9.94□□□□□ -0.82
SNX13-203ENST00000428135 PHGDHO43175 533 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 ATP5BP06576 529 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 ASGR1P07306 291 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 NPR3P17342 541 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 HSPA14Q0VDF9 509 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 PRKAA1Q13131 559 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 PIGZQ86VD9 579 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 CHPFQ8IZ52 775 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 COL26A1Q96A83 441 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 FAM105AQ9NUU6 356 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 MTO1Q9Y2Z2 717 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 MRC1P22897 1456 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 NEDD8-MDP1E9PL57 170 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 TRUB2O95900 331 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 RARAP10276 462 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 ITGB3BPQ13352 177 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 GALNT3Q14435 633 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 ZNF268Q14587 947 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 ANKRD23Q86SG2 305 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 BRI3BPQ8WY22 251 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 MKL1Q969V6 931 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 BBS2Q9BXC9 721 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 CHST7Q9NS84 486 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 DMGDHQ9UI17 866 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 UBIAD1Q9Y5Z9 338 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 NFAT5O94916 1531 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 KLRG2A4D1S0 409 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 MSI1O43347 362 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 MAFO75444 373 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 MMP3P08254 477 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 UBTFL6P0CB48 400 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 MAPTP10636 758 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 TRPC1P48995 793 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 FAM110CQ1W6H9 321 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 USP41Q3LFD5 358 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 AGBL2Q5U5Z8 902 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 CDKAL1Q5VV42 579 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 RAET1GQ6H3X3 334 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 C15orf52Q6ZUT6 534 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 CENPLQ8N0S6 344 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 ROPN1BQ9BZX4 212 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 ROPN1Q9HAT0 212 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 PPIEQ9UNP9 301 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 TRPC5OSA6NMA1 111 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 FZD9O00144 591 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 SOCS7O14512 581 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 INPP4BO15327 924 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 CABYRO75952 493 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 TSPAN8P19075 237 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 MAGEA9P43362 315 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 ITGA9Q13797 1035 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 CAMKK1Q8N5S9 505 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 TMEM161BQ8NDZ6 487 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 CXorf40AQ8TE69 158 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 TSC22D3Q99576 134 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 PABPC3Q9H361 631 aaKnown RBP9.93□□□□□ -0.82
SNX13-203ENST00000428135 KCNMB3Q9NPA1 279 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 TMPRSS4Q9NRS4 437 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 KLC4Q9NSK0 619 aa9.93□□□□□ -0.82
SNX13-203ENST00000428135 DRG1Q9Y295 367 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms