RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TGM1P22735 817 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 OXTRP30559 389 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 FNTBP49356 437 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 FOXK2Q01167 660 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 MESP2Q0VG99 397 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 SCAPQ12770 1279 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 PTP4A2Q12974 167 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 TRIM14Q14142 442 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 ACAP1Q15027 740 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 CLEC16AQ2KHT3 1053 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 ZSCAN23Q3MJ62 389 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 PLK5Q496M5 336 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 C2orf27AQ580R0 203 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 PMS2CLQ68D20 193 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 NAIF1Q69YI7 327 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 NADSYN1Q6IA69 706 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 ADIPOR2Q86V24 386 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 PSTKQ8IV42 348 aaKnown RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 CHPFQ8IZ52 775 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 ALLCQ8N6M5 410 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 MDGA1Q8NFP4 955 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 CADM4Q8NFZ8 388 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 OSBPL2Q9H1P3 480 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 WDCPQ9H6R7 721 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 SUN2Q9UH99 717 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 EVLQ9UI08 416 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-203ENST00000428014 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 GGA2Q9UJY4 613 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 WDR87Q6ZQQ6 2873 aa9.45□□□□□ -0.9
SMC1A-203ENST00000428014 EML5Q05BV3 1969 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 C2CD4BA6NLJ0 364 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 M0QYT0 321 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF806P0C7X5 589 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 MYBL1P10243 752 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 TACR2P21452 398 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 SLC6A4P31645 630 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 RDXP35241 583 aaKnown RBP9.44□□□□□ -0.9
SMC1A-203ENST00000428014 ETFBP38117 255 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 CDH4P55283 916 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 PRSS12P56730 875 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 KDSRQ06136 332 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 CDH18Q13634 790 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 GEN1Q17RS7 908 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 ARL13BQ3SXY8 428 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
SMC1A-203ENST00000428014 FAM102AQ5T9C2 384 aaPredicted RBP9.44□□□□□ -0.9
SMC1A-203ENST00000428014 DMRTA1Q5VZB9 504 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 TSSK4Q6SA08 328 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 USP30Q70CQ3 517 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 MON1BQ7L1V2 547 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 PASD1Q8IV76 773 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 NAT16Q8N8M0 369 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 TTC16Q8NEE8 873 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 P2RY11Q96G91 374 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 PRICKLE1Q96MT3 831 aaPredicted RBP9.44□□□□□ -0.9
SMC1A-203ENST00000428014 AGPAT1Q99943 283 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 C2orf42Q9NWW7 574 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 ADAM22Q9P0K1 906 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 USP36Q9P275 1121 aaKnown RBP9.44□□□□□ -0.9
SMC1A-203ENST00000428014 NCDNQ9UBB6 729 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 STON1Q9Y6Q2 735 aa9.44□□□□□ -0.9
SMC1A-203ENST00000428014 CFAP54Q96N23 3096 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 DOCK4Q8N1I0 1966 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 MUC22E2RYF6 1773 aaPredicted RBP9.43□□□□□ -0.9
SMC1A-203ENST00000428014 ANKRD62A6NC57 917 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 C10orf142B7Z368 130 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 ALOX15BO15296 676 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 TEX33O43247 280 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 AP5Z1O43299 807 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 CBFA2T2O43439 604 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 TBL1XO60907 577 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 SERPINC1P01008 464 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 CALCAP01258 141 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 HMBSP08397 361 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 PNMA6AP0CW24 399 aaPredicted RBP9.43□□□□□ -0.9
SMC1A-203ENST00000428014 KRT3P12035 628 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 GABRG2P18507 467 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
SMC1A-203ENST00000428014 SDC4P31431 198 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 FLT3P36888 993 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF143P52747 638 aaPredicted RBP9.43□□□□□ -0.9
SMC1A-203ENST00000428014 UBASH3AP57075 661 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 ZBED6P86452 979 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 FANCCQ00597 558 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 DEUP1Q05D60 604 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 SLC20A2Q08357 652 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
SMC1A-203ENST00000428014 ZNF234Q14588 700 aa9.43□□□□□ -0.9
SMC1A-203ENST00000428014 TAF5Q15542 800 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms