RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CCDC185Q8N715 623 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZFP28Q8NHY6 868 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 UTP15Q8TED0 518 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 INPP5DQ92835 1189 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CNBD2Q96M20 576 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 JSRP1Q96MG2 331 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 FRMD8P1Q9BZ68 369 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 GANQ9H2C0 597 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 EPB41L4AQ9HCS5 686 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 TCOF1Q13428 1488 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 LGALS16A8MUM7 142 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 BOLA2-SMG1P6H3BVE0 249 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PRODHO43272 600 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KLHL18O94889 574 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 HMGCRP04035 888 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SKIV2L2P42285 1042 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 CLCN3P51790 818 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ERVK-9P63128 1117 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ERVK-24P63145 666 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SP2Q02086 613 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CYLC2Q14093 348 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 LRRC32Q14392 662 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 FUT11Q495W5 492 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SWT1Q5T5J6 900 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 ZNF574Q6ZN55 896 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 GLT6D1Q7Z4J2 308 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 ZNF354BQ96LW1 612 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 C3orf14Q9HBI5 128 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 RRAGDQ9NQL2 400 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 SNTG2Q9NY99 539 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SH3BP4Q9P0V3 963 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 COPG2Q9UBF2 871 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KLHL41O60662 606 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ENO3P13929 434 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 TGM2P21980 687 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 DHPSP49366 369 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 FKBP1BP68106 108 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 BST2Q10589 180 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 CYB5R4Q7L1T6 521 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 STK32CQ86UX6 486 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D10CQ8IV04 446 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LINC00301Q8NCQ3 95 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SLC30A5Q8TAD4 765 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ARNTL2Q8WYA1 636 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ZNF669Q96BR6 464 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 ADAM2Q99965 735 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PACSIN1Q9BY11 444 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PITPNM2Q9BZ72 1349 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 SAC3D1A6NKF1 404 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KPNA5O15131 536 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 DTNBO60941 627 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KATNA1O75449 491 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KRT6AP02538 564 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ALBP02768 609 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KRT6BP04259 564 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ABCB1P08183 1280 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 GPD2P43304 727 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KRT6CP48668 564 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 RPS6P62753 249 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 MLLT1Q03111 559 aaPredicted RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 KLC1Q07866 573 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PDK2Q15119 407 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LIX1Q8N485 282 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ACOX2Q99424 681 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 HERPUD2Q9BSE4 406 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 TMEM117Q9H0C3 514 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CCDC134Q9H6E4 229 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ACTR8Q9H981 624 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 IL1RL2Q9HB29 575 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 KCNH7Q9NS40 1196 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 MRPS33Q9Y291 106 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 CARD8Q9Y2G2 431 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CHD1O14646 1710 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 QSOX1O00391 747 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PAICSP22234 425 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 TKTL1P51854 596 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ARHGDIBP52566 201 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 EXOSC10Q01780 885 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 RBBP4Q09028 425 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 GIT2Q14161 759 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 ALX1Q15699 326 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 CBWD6Q4V339 395 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 WLSQ5T9L3 541 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 TCEAL6Q6IPX3 200 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 FAM45BPQ6NSW5 357 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 DENND5BQ6ZUT9 1274 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 MIER2Q8N344 545 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 FEZF2Q8TBJ5 459 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 GRIN3AQ8TCU5 1115 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 TESCQ96BS2 214 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 MTERF3Q96E29 417 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 UQCC2Q9BRT2 126 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 GINS4Q9BRT9 223 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 GTPBP2Q9BX10 602 aaKnown RBP5.85□□□□□ -1.47
HERC4-206ENST00000427635 HIPK3Q9H422 1215 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 LY9Q9HBG7 655 aa5.85□□□□□ -1.47
HERC4-206ENST00000427635 PDE11AQ9HCR9 933 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms