RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 COL9A2Q14055 689 aaPredicted RBP20.75■□□□□ 0.91
CCDC107-206ENST00000426546 TPD52L1Q16890 204 aaPredicted RBP20.75■□□□□ 0.91
CCDC107-206ENST00000426546 CCDC117Q8IWD4 279 aaPredicted RBP20.75■□□□□ 0.91
CCDC107-206ENST00000426546 ZNF366Q8N895 744 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 MYEOVQ96EZ4 313 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 BTN2A3PQ96KV6 586 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 ZDHHC5Q9C0B5 715 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 CLSTN2Q9H4D0 955 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 PRSS16Q9NQE7 514 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 SUN2Q9UH99 717 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 PCDHGC3Q9UN70 934 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 MSRB2Q9Y3D2 182 aa20.75■□□□□ 0.91
CCDC107-206ENST00000426546 NUMA1Q14980 2115 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 TRUB2O95900 331 aaKnown RBP20.74■□□□□ 0.91
CCDC107-206ENST00000426546 GLI1P08151 1106 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 MAOBP27338 520 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 APBA1Q02410 837 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 SLC14A1Q13336 389 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 MAN2A1Q16706 1144 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 DCAF12L1Q5VU92 463 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 FAM114A1Q8IWE2 563 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 KDM1BQ8NB78 822 aa20.74■□□□□ 0.91
CCDC107-206ENST00000426546 NYNRINQ9P2P1 1898 aaKnown RBP20.74■□□□□ 0.91
CCDC107-206ENST00000426546 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 GJB3O75712 270 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 CSKP41240 450 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 ST8SIA6P61647 398 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 FAM193AP78312 1265 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 PTK2Q05397 1052 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 EIF4EBP2Q13542 120 aaPredicted RBP20.73■□□□□ 0.91
CCDC107-206ENST00000426546 DCAF6Q58WW2 860 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 ZC3H12AQ5D1E8 599 aaKnown RBP20.73■□□□□ 0.91
CCDC107-206ENST00000426546 CARNMT1Q8N4J0 409 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 OR2I1PQ8NGU4 316 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 MYO19Q96H55 970 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 CPXM1Q96SM3 734 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 SIX2Q9NPC8 291 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.73■□□□□ 0.91
CCDC107-206ENST00000426546 ASNSD1Q9NWL6 643 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 TJP2Q9UDY2 1190 aa20.73■□□□□ 0.91
CCDC107-206ENST00000426546 XPO7Q9UIA9 1087 aaKnown RBP20.73■□□□□ 0.91
CCDC107-206ENST00000426546 INTS6Q9UL03 887 aaKnown RBP20.73■□□□□ 0.91
CCDC107-206ENST00000426546 LUC7L3O95232 432 aaKnown RBP20.72■□□□□ 0.91
CCDC107-206ENST00000426546 DNTTP04053 509 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 CD59P13987 128 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 RPS14P62263 151 aaKnown RBP20.72■□□□□ 0.91
CCDC107-206ENST00000426546 GRIK2Q13002 908 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 ARID5BQ14865 1188 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 EFHC1Q5JVL4 640 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 ZNF776Q68DI1 518 aaPredicted RBP20.72■□□□□ 0.91
CCDC107-206ENST00000426546 FAM124AQ86V42 546 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 CHSY1Q86X52 802 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 LGI2Q8N0V4 545 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 CFAP52Q8N1V2 620 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 ZCCHC9Q8N567 271 aaKnown RBP20.72■□□□□ 0.91
CCDC107-206ENST00000426546 WDTC1Q8N5D0 677 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 ATP6V0D2Q8N8Y2 350 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 PPP1R13BQ96KQ4 1090 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 NOX5Q96PH1 765 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 SLC2A13Q96QE2 648 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 MIR1-1HGQ9H1L0 117 aa20.72■□□□□ 0.91
CCDC107-206ENST00000426546 KCNU1A8MYU2 1149 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 H0Y626 953 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 BCAT2O15382 392 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 HSF2BPO75031 334 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 MOCS3O95396 460 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 SLC2A3P11169 496 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 TACR2P21452 398 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 ERCC5P28715 1186 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 ACSL1P33121 698 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 PITX1P78337 314 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 CDK17Q00537 523 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 HNRNPDQ14103 355 aaKnown RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 TAF5Q15542 800 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 HNRNPA1L2Q32P51 320 aaKnown RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 DPCR1Q3MIW9 517 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 TTC31Q49AM3 519 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 FSCBQ5H9T9 825 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 PITRM1Q5JRX3 1037 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 RAP1GAP2Q684P5 730 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 PASD1Q8IV76 773 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 BTBD1Q9H0C5 482 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 RSPH9Q9H1X1 276 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 NDST4Q9H3R1 872 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 KIAA1522Q9P206 1035 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 SLC12A6Q9UHW9 1150 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 EIF2B4Q9UI10 523 aaKnown RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 DACH1Q9UI36 760 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 DNAJC12Q9UKB3 198 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 AJAP1Q9UKB5 411 aaPredicted RBP20.71■□□□□ 0.91
CCDC107-206ENST00000426546 SCML1Q9UN30 329 aa20.71■□□□□ 0.91
CCDC107-206ENST00000426546 FAM221BA6H8Z2 402 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 F5H5T6 163 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 TRIM16O95361 564 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 SRPRAP08240 638 aaKnown RBP20.7■□□□□ 0.9
CCDC107-206ENST00000426546 PRKCSHP14314 528 aaPredicted RBP20.7■□□□□ 0.9
CCDC107-206ENST00000426546 SNX16P57768 344 aa20.7■□□□□ 0.9
CCDC107-206ENST00000426546 TTC39BQ5VTQ0 682 aaPredicted RBP20.7■□□□□ 0.9
CCDC107-206ENST00000426546 C11orf57Q6ZUT1 292 aaPredicted RBP20.7■□□□□ 0.9
CCDC107-206ENST00000426546 CHCHD4Q8N4Q1 142 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms