RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 E5RJQ4 531 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ACAT1P24752 427 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 FBXL19Q6PCT2 694 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 KCNMB4Q86W47 210 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 KRT78Q8N1N4 520 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 NKAPQ8N5F7 415 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 AGR3Q8TD06 166 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 PHF21AQ96BD5 680 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 SEC16BQ96JE7 1060 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 KRT8P05787 483 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ATXN3P54252 364 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.39□□□□□ -0.75
SP1-202ENST00000426431 SETMARQ53H47 684 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 EARS2Q5JPH6 523 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ACTR8Q9H981 624 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 LRRC37A3O60309 1634 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 AFDNP55196 1824 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 BTBD19C9JJ37 291 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 H3BQF6 201 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 USP2O75604 605 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 RPL3P39023 403 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 GLUD2P49448 558 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 PCID2Q5JVF3 399 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 CLEC4FQ8N1N0 589 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 CDC42EP4Q9H3Q1 356 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 SIK3Q9Y2K2 1263 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 CCT8L1PA6NM43 557 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 DDX3XO00571 662 aaKnown RBP eCLIP10.39□□□□□ -0.75
SP1-202ENST00000426431 EOMESO95936 686 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 GLUD1P00367 558 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 FAM163BP0C2L3 166 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 HDCP19113 662 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 KDELR1P24390 212 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 GPC1P35052 558 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 SOX10P56693 466 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 DUSP16Q9BY84 665 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 ANLNQ9NQW6 1124 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 GPATCH2LQ9NWQ4 482 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 SHPRHQ149N8 1683 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 AKAP10O43572 662 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 RRM2P31350 389 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 INSCQ1MX18 579 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 KHDRBS2Q5VWX1 349 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 WDR59Q6PJI9 974 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 TIFAQ96CG3 184 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ERP27Q96DN0 273 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 DACH2Q96NX9 599 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 OR12D3Q9UGF7 316 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 TIMM13Q9Y5L4 95 aaPredicted RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 KELP23276 732 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 CCND1P24385 295 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 SKIV2L2P42285 1042 aaKnown RBP10.39□□□□□ -0.75
SP1-202ENST00000426431 STRADAQ7RTN6 431 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ANKRD7Q92527 254 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 EME1Q96AY2 570 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 OSGEPQ9NPF4 335 aa10.39□□□□□ -0.75
SP1-202ENST00000426431 ASTN1O14525 1302 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 GNA13Q14344 377 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 PKN2Q16513 984 aaKnown RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 ARID3BQ8IVW6 561 aaPredicted RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 SCUBE3Q8IX30 993 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 NOA1Q8NC60 698 aaKnown RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 VPS33AQ96AX1 596 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 PACSIN1Q9BY11 444 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 TMCC3Q9ULS5 477 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 ZBTB14O43829 449 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 PGK1P00558 417 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 SERPINE1P05121 402 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 ATP4AP20648 1035 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 MATKP42679 507 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 TCEA2Q15560 299 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 ZCCHC9Q8N567 271 aaKnown RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 FAM111AQ96PZ2 611 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 ALG13Q9NP73 1137 aaKnown RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 C6orf203Q9P0P8 240 aaPredicted RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 MAGEC1O60732 1142 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 GSNP06396 782 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 GUCA1AP43080 201 aaPredicted RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 TTPAP49638 278 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 THOP1P52888 689 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 DMC1Q14565 340 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 CBWD3Q5JTY5 395 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 CBWD5Q5RIA9 395 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 JADE3Q92613 823 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 GNPTGQ9UJJ9 305 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 VAV3Q9UKW4 847 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 A0A0B4J269 797 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 ACOX1Q15067 660 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 KCNT2Q6UVM3 1135 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 LRRC55Q6ZSA7 311 aa10.38□□□□□ -0.75
SP1-202ENST00000426431 APLFQ8IW19 511 aaPredicted RBP10.38□□□□□ -0.75
SP1-202ENST00000426431 CXorf40AQ8TE69 158 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms