RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 BCAT2O15382 392 aaPredicted RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 ACSL4O60488 711 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 DKK1O94907 266 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 TRIM16O95361 564 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 FTH1P19P0C7X4 201 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 PABPC1P11940 636 aaKnown RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 GNSP15586 552 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 CDK11BP21127 795 aaKnown RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 GNA15P30679 374 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 GPD2P43304 727 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 MYL5Q02045 173 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 RING1Q06587 406 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 EIF4EBP2Q13542 120 aaPredicted RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 RAPGEF1Q13905 1077 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 ANO6Q4KMQ2 910 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 KCNT1Q5JUK3 1230 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 MPP7Q5T2T1 576 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 MBLAC2Q68D91 279 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 ENOSF1Q7L5Y1 443 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 FAM124AQ86V42 546 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 CACUL1Q86Y37 369 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 NAXDQ8IW45 347 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 AOPEPQ8N6M6 819 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 WFIKKN2Q8TEU8 576 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 RNF139Q8WU17 664 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 ADAMTS14Q8WXS8 1223 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 TTC17Q96AE7 1141 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 PCED1AQ9H1Q7 454 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 ACP6Q9NPH0 428 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 ST7Q9NRC1 585 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 CYTH4Q9UIA0 394 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
VRK3-203ENST00000424804 GTPBP10A4D1E9 387 aaKnown RBP13.46□□□□□ -0.25
VRK3-203ENST00000424804 MEI4A8MW99 385 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 TBL1XO60907 577 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 LTFP02788 710 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 DLDP09622 509 aaKnown RBP13.46□□□□□ -0.25
VRK3-203ENST00000424804 ZNF883P0CG24 379 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 PNMA6AP0CW24 399 aaPredicted RBP13.46□□□□□ -0.25
VRK3-203ENST00000424804 ZNF445P59923 1031 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 KRT31Q15323 416 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 STILQ15468 1287 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 ZNF423Q2M1K9 1284 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 HLA-BQ31612 363 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 FSCBQ5H9T9 825 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 FIBINQ8TAL6 211 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 MIS12Q9H081 205 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 MIR1-1HGQ9H1L0 117 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 LHX5Q9H2C1 402 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 GAREM1Q9H706 876 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 OSGEPQ9NPF4 335 aa13.46□□□□□ -0.25
VRK3-203ENST00000424804 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
VRK3-203ENST00000424804 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.46□□□□□ -0.25
VRK3-203ENST00000424804 APC2O95996 2303 aa13.46□□□□□ -0.26
VRK3-203ENST00000424804 PLXNA2O75051 1894 aa13.46□□□□□ -0.26
VRK3-203ENST00000424804 TP53BP1Q12888 1972 aaPredicted RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 A0A1B0GVT2 93 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 FAM170AA1A519 330 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 MED7O43513 233 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 CSNK1EP49674 416 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 TBX4P57082 545 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 RPS24P62847 133 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 E2F5Q15329 346 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 FNDC3BQ53EP0 1204 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 DENND1BQ6P3S1 775 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 CCNI2Q6ZMN8 369 aaPredicted RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 AHI1Q8N157 1196 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 DQX1Q8TE96 717 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 ZCCHC14Q8WYQ9 949 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 BIRC7Q96CA5 298 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 EBF2Q9HAK2 575 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 PLA2G4CQ9UP65 541 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 BTBD3Q9Y2F9 522 aa13.45□□□□□ -0.26
VRK3-203ENST00000424804 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
VRK3-203ENST00000424804 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 ACACAQ13085 2346 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 ATRXP46100 2492 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 SYCE3A1L190 88 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 BECN2A8MW95 431 aa13.44□□□□□ -0.26
VRK3-203ENST00000424804 IRAK2O43187 625 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms