RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GPR150Q8NGU9 434 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PSMA8Q8TAA3 256 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 IL17DQ8TAD2 202 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 FIBINQ8TAL6 211 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CSGALNACT1Q8TDX6 532 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CACTINQ8WUQ7 758 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 LPPQ93052 612 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 C3orf49Q96BT1 292 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TUBGCP3Q96CW5 907 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CYFIP2Q96F07 1278 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TMEM176AQ96HP8 235 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CLPTM1LQ96KA5 538 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PLEKHG4BQ96PX9 1271 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 FAM118BQ9BPY3 351 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 RHOXF2Q9BQY4 288 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 NTPCRQ9BSD7 190 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 MYL10Q9BUA6 226 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 UTP14AQ9BVJ6 771 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF518BQ9C0D4 1074 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 REXO4Q9GZR2 422 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ABCG8Q9H221 673 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 SLITRK6Q9H5Y7 841 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CHODLQ9H9P2 273 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 HEYLQ9NQ87 328 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DDX4Q9NQI0 724 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 POLE3Q9NRF9 147 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 SNX15Q9NRS6 342 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 GIMAP4Q9NUV9 329 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TDP1Q9NUW8 608 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ANO10Q9NW15 660 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 AURKAIP1Q9NWT8 199 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PPP1R14DQ9NXH3 145 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DDX43Q9NXZ2 648 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 AATFQ9NY61 560 aaKnown RBP eCLIP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 LPAR3Q9UBY5 353 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CNOT7Q9UIV1 285 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TSPYL4Q9UJ04 414 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TMPRSS11EQ9UL52 423 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PCDHA6Q9UN73 950 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 EXOC7Q9UPT5 735 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 NAALADL1Q9UQQ1 740 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PIN4Q9Y237 131 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TMED5Q9Y3A6 229 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PCDHA13Q9Y5I0 950 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 COL15A1P39059 1388 aa3.9□□□□□ -1.78
SF3B1-205ENST00000424674 TRAV34A0A0B4J273 112 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 A0A0G2JPF8 293 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 A0A1W2PQ09 198 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 A0A1W2PRX2 142 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 GLOD5A6NK44 160 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CAPN14A8MX76 684 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 HNRNPCL3B7ZW38 293 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 E7EVH7 732 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF263O14978 683 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TP73O15350 636 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CYP27B1O15528 508 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 KCNQ3O43525 872 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PEX11AO75192 247 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RTN2O75298 545 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PRPF6O94906 941 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TRIM16O95361 564 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PFKMP08237 780 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 HNRNPCL4P0DMR1 293 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 GSPT1P15170 499 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CDH2P19022 906 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CD9P21926 228 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 KELP23276 732 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PTAFRP25105 342 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 IL1R2P27930 398 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PPARGP37231 505 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MTIF2P46199 727 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PIP4K2AP48426 406 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 HARS2P49590 506 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 GPR15P49685 360 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 HSD17B4P51659 736 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 YBEYP58557 167 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 DGCR2P98153 550 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 KRT17Q04695 432 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PPARAQ07869 468 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 NSUN2Q08J23 767 aaKnown RBP eCLIP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SLC13A2Q13183 592 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SGCGQ13326 291 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 DCTN2Q13561 401 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TRIM25Q14258 630 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TBCCQ15814 346 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 INAQ16352 499 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 PRICKLE4Q2TBC4 344 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC40Q4G0X9 1142 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 KHDC1Q4VXA5 237 aaKnown RBP3.9□□□□□ -1.79
SF3B1-205ENST00000424674 BOLA3Q53S33 107 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CCDC178Q5BJE1 867 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 CRB2Q5IJ48 1285 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TTC39AQ5SRH9 613 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 RRAGBQ5VZM2 374 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 IGFL4Q6B9Z1 124 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 ADALQ6DHV7 355 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 SLFN12LQ6IEE8 588 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 TRAT1Q6PIZ9 186 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 GBP6Q6ZN66 633 aa3.9□□□□□ -1.79
SF3B1-205ENST00000424674 MSANTD1Q6ZTZ1 278 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms