RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 NPAS1Q99742 590 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 ABHD14AQ9BUJ0 271 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 HTATIP2Q9BUP3 242 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 EPS8L2Q9H6S3 715 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 UTS2RQ9UKP6 389 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 LAMP3Q9UQV4 416 aa4.54□□□□□ -1.68
LINC00397-201ENST00000422074 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 RPP40O75818 363 aaKnown RBP4.53□□□□□ -1.68
LINC00397-201ENST00000422074 HOXB2P14652 356 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 HTR6P50406 440 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 NEK3P51956 506 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 PGGT1BP53609 377 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 ALDH18A1P54886 795 aaKnown RBP4.53□□□□□ -1.68
LINC00397-201ENST00000422074 TAS2R50P59544 299 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 ERV3-1Q14264 604 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 LRIG3Q6UXM1 1119 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 SRLQ86TD4 932 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 IPO4Q8TEX9 1081 aaKnown RBP4.53□□□□□ -1.68
LINC00397-201ENST00000422074 EME1Q96AY2 570 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 TNIP3Q96KP6 325 aa4.53□□□□□ -1.68
LINC00397-201ENST00000422074 DPPA5A6NC42 116 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 GOLGA6L3A6NEY3 463 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 A6NNC1 897 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 KCNJ18B7U540 433 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 PIP5K1BO14986 540 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 ZC3H11AO75152 810 aaKnown RBP eCLIP4.52□□□□□ -1.69
LINC00397-201ENST00000422074 SYF2O95926 243 aaKnown RBP4.52□□□□□ -1.69
LINC00397-201ENST00000422074 ALDOAP04075 364 aaKnown RBP4.52□□□□□ -1.69
LINC00397-201ENST00000422074 ABCB4P21439 1286 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 KLRK1P26718 216 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 RBM6P78332 1123 aaKnown RBP4.52□□□□□ -1.69
LINC00397-201ENST00000422074 SHC2P98077 582 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 PRTGQ2VWP7 1150 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 TTC39AQ5SRH9 613 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 C6orf10Q5SRN2 563 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 ZNF549Q6P9A3 640 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 RTL10Q7L3V2 364 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 TRAPPC11Q7Z392 1133 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 FAM186BQ8IYM0 893 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 B4GALNT2Q8NHY0 566 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 EID2BQ96D98 161 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 ZNF700Q9H0M5 742 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 TASP1Q9H6P5 420 aa4.52□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A18PA6NE21 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A16PA6NEW6 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A9PA6NNJ1 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A5PA8MXJ8 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FOXO6A8MYZ6 492 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 MDM4O15151 490 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 LCKP06239 509 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 ALDOCP09972 364 aaKnown RBP4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A15PP0C7V4 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM90A14PP0C7W9 464 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 PPM1AP35813 382 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 ADPRHP54922 357 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 PTK2BQ14289 1009 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 PTGR1Q14914 329 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 ODF3L2Q3SX64 289 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 KLHL22Q53GT1 634 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 RUSC1-AS1Q66K80 236 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 RINT1Q6NUQ1 792 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 ERAP2Q6P179 960 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 B4GALNT4Q76KP1 1039 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 FAM71BQ8TC56 605 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 TMEM174Q8WUU8 243 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 CENPIQ92674 756 aaPredicted RBP4.51□□□□□ -1.69
LINC00397-201ENST00000422074 KAT2AQ92830 837 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 REXO5Q96IC2 774 aaKnown RBP4.51□□□□□ -1.69
LINC00397-201ENST00000422074 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
LINC00397-201ENST00000422074 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
LINC00397-201ENST00000422074 NLRC4Q9NPP4 1024 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
LINC00397-201ENST00000422074 MBD3L5A6NJ08 208 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-201ENST00000422074 RHODO00212 210 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 DNPH1O43598 174 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 LARGE1O95461 756 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 GRK5P34947 590 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 TECP42680 631 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 P2RX3P56373 397 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 FAM3BP58499 235 aaPredicted RBP4.5□□□□□ -1.69
LINC00397-201ENST00000422074 SEMA3AQ14563 771 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 NUGGCQ68CJ6 796 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 ANKRD40Q6AI12 368 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 GATAD2AQ86YP4 633 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 MUL1Q969V5 352 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 CCDC134Q9H6E4 229 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 SLC12A4Q9UP95 1085 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 CNTN6Q9UQ52 1028 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 DTX4Q9Y2E6 619 aa4.5□□□□□ -1.69
LINC00397-201ENST00000422074 COPG1Q9Y678 874 aaKnown RBP4.5□□□□□ -1.69
LINC00397-201ENST00000422074 SLC38A8A6NNN8 435 aa4.49□□□□□ -1.69
LINC00397-201ENST00000422074 MCIDASD6RGH6 385 aa4.49□□□□□ -1.69
LINC00397-201ENST00000422074 FFAR2O15552 330 aa4.49□□□□□ -1.69
LINC00397-201ENST00000422074 ASNA1O43681 348 aa4.49□□□□□ -1.69
LINC00397-201ENST00000422074 KLKB1P03952 638 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms