RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 ENTPD3O75355 529 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 LTFP02788 710 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 GPD1P21695 349 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 MPP3Q13368 585 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 LAYNQ6UX15 382 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 NUP93Q8N1F7 819 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 AGAP3Q96P47 875 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 CIB1Q99828 191 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 WDR41Q9HAD4 459 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 ZNF232Q9UNY5 417 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 C7orf72A4D263 438 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 MICAL2O94851 1124 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 STBD1O95210 358 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 DPP6P42658 865 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 PTGER2P43116 358 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 POTEHQ6S545 545 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 FNDC8Q8TC99 324 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 DIS3LQ8TF46 1054 aaKnown RBP17.04■□□□□ 0.32
PKP4-204ENST00000421462 PDCD6IPQ8WUM4 868 aaKnown RBP17.04■□□□□ 0.32
PKP4-204ENST00000421462 LRTOMTQ8WZ04 291 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 NLRP4Q96MN2 994 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 PAIP1Q9H074 479 aaKnown RBP17.04■□□□□ 0.32
PKP4-204ENST00000421462 CDH19Q9H159 772 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 FAM49BQ9NUQ9 324 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 THEGQ9P2T0 379 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 EBF1Q9UH73 591 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 DCDC2Q9UHG0 476 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 MX2P20592 715 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 GRK2P25098 689 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 ASPAP45381 313 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 NDST2P52849 883 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 TAZQ16635 292 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 ZNF696Q9H7X3 374 aa17.04■□□□□ 0.32
PKP4-204ENST00000421462 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 LSM12Q3MHD2 195 aaKnown RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 KCNT2Q6UVM3 1135 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 PATL1Q86TB9 770 aaKnown RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 KBTBD7Q8WVZ9 684 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 FERMT1Q9BQL6 677 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 RNF11Q9Y3C5 154 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 PLOD2O00469 737 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 IL4RP24394 825 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 VARSP26640 1264 aaKnown RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 SLC5A3P53794 718 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 RALGDSQ12967 914 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 C16orf89Q6UX73 402 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 LZICQ8WZA0 190 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 PPP1R16BQ96T49 567 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
PKP4-204ENST00000421462 ARMC7Q9H6L4 198 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 CDY2AQ9Y6F7 541 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
PKP4-204ENST00000421462 H0YCG3 227 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 PRKCGP05129 697 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ARSAP15289 507 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 CKMT2P17540 419 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ME2P23368 584 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 CDK18Q07002 472 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ZNF423Q2M1K9 1284 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 MTX3Q5HYI7 312 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 ADCY4Q8NFM4 1077 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 LGMNQ99538 433 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 SUDS3Q9H7L9 328 aaPredicted RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 SNX15Q9NRS6 342 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 PCDHGC3Q9UN70 934 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 TTC36A6NLP5 189 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 MED7O43513 233 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 PHKA2P46019 1235 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ATP1A4Q13733 1029 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 HEATR6Q6AI08 1181 aaKnown RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 EPGNQ6UW88 154 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 FAM183BPQ6ZVS7 135 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 SPNS2Q8IVW8 549 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 C12orf29Q8N999 325 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 ZBTB8BQ8NAP8 495 aaPredicted RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 DHX33Q9H6R0 707 aaKnown RBP17.02■□□□□ 0.32
PKP4-204ENST00000421462 PDLIM7Q9NR12 457 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 MKS1Q9NXB0 559 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 COX16Q9P0S2 106 aa17.02■□□□□ 0.32
PKP4-204ENST00000421462 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 RGSL1A5PLK6 1076 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 JUNP05412 331 aaKnown RBP17.02■□□□□ 0.31
PKP4-204ENST00000421462 SOX11P35716 441 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 MCCD1P59942 119 aaPredicted RBP17.02■□□□□ 0.31
PKP4-204ENST00000421462 SFSWAPQ12872 951 aaKnown RBP17.02■□□□□ 0.31
PKP4-204ENST00000421462 APOFQ13790 326 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 SCUBE3Q8IX30 993 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 DCLK2Q8N568 766 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 HAUS8Q9BT25 410 aa17.02■□□□□ 0.31
PKP4-204ENST00000421462 STN1Q9H668 368 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms